RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ECI1P42126 302 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 BRICD5Q6PL45 260 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 SLC16A12Q6ZSM3 486 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 FAM122BQ7Z309 247 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 LINC01555Q8NAE3 123 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 MORN4Q8NDC4 146 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 OR52N5Q8NH56 324 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 TMED6Q8WW62 240 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 MRGPRX3Q96LB0 322 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 NEURL2Q9BR09 285 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 TCEAL7Q9BRU2 100 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 C20orf141Q9NUB4 165 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 IL20Q9NYY1 176 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 R4GMQ9 66 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 RAB5CP51148 216 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 STARD6P59095 220 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 MCCD1P59942 119 aaPredicted RBP13.14□□□□□ -0.31
CACNB1-206ENST00000539338 BAMBIQ13145 260 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 PAN3Q58A45 887 aaKnown RBP13.14□□□□□ -0.31
CACNB1-206ENST00000539338 AVPI1Q5T686 147 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 TIGD3Q6B0B8 471 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 BORCS7Q96B45 105 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 SAMD10Q9BYL1 202 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 POMT2Q9UKY4 750 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 CASP8AP2Q9UKL3 1982 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 OR5H14A6NHG9 310 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 OR6C76A6NM76 312 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 M0R135 149 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 HOXB3P14651 431 aaPredicted RBP13.14□□□□□ -0.31
CACNB1-206ENST00000539338 EXOSC2Q13868 293 aaKnown RBP13.14□□□□□ -0.31
CACNB1-206ENST00000539338 FAM53BQ14153 422 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 EDDM3AQ14507 147 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 OR6K3Q8NGY3 331 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 OR51F2Q8NH61 342 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 ZNF799Q96GE5 643 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 PBOV1Q9GZY1 135 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 PLEKHB1Q9UF11 243 aaPredicted RBP13.14□□□□□ -0.31
CACNB1-206ENST00000539338 HRH1P35367 487 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 SNCAP37840 140 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 F2RL1P55085 397 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 EDDM3BP56851 147 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 HMGN3Q15651 99 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 OR4A16Q8NH70 328 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 MED30Q96HR3 178 aa13.14□□□□□ -0.31
CACNB1-206ENST00000539338 DOCK1Q14185 1865 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 RAB27BO00194 218 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 OR4E1P0C645 316 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 AADACP22760 399 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 GUCA2AQ02747 115 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 PXDC1Q5TGL8 231 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 PMS2CLQ68D20 193 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 FAM122CQ6P4D5 195 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 ST8SIA1Q92185 356 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 QPCTLQ9NXS2 382 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 B9D1Q9UPM9 204 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 DSCR3O14972 297 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 CDK5Q00535 292 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 PCK2Q16822 640 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 NLRC3Q7RTR2 1065 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 ZFP82Q8N141 532 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 SEH1LQ96EE3 360 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 LIN37Q96GY3 246 aaPredicted RBP13.13□□□□□ -0.31
CACNB1-206ENST00000539338 GFOD1Q9NXC2 390 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 NUP214P35658 2090 aaPredicted RBP13.13□□□□□ -0.31
CACNB1-206ENST00000539338 FRG2CA6NGY1 282 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 C17orf112F2Z3M2 114 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 TBXA2RP21731 343 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 TGM1P22735 817 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 CRYBB2P43320 205 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 SLC10A1Q14973 349 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 SSX1Q16384 188 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 LILRA6Q6PI73 481 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 OR4C16Q8NGL9 310 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 OR1S2Q8NGQ3 325 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 KTI12Q96EK9 354 aaPredicted RBP13.13□□□□□ -0.31
CACNB1-206ENST00000539338 DEGS1O15121 323 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 CD160O95971 181 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 GPNMBQ14956 572 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 OR8G2PQ6IF36 304 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 ZNF680Q8NEM1 530 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 OR2G3Q8NGZ4 309 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 KCNJ15Q99712 375 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 PIGMQ9H3S5 423 aa13.13□□□□□ -0.31
CACNB1-206ENST00000539338 A0A1B0GUH1 482 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 ZFP92A6NM28 416 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 VAMP5O95183 116 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 PTHLHP12272 177 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 NME1P15531 152 aaKnown RBP13.12□□□□□ -0.31
CACNB1-206ENST00000539338 PNLIPRP2P54317 469 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 ZNF528Q3MIS6 628 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 OR2AK2Q8NG84 335 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 MARCH1Q8TCQ1 289 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 SFT2D1Q8WV19 159 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 SMIM4Q8WVI0 70 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms