RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SLC2A3P11169 496 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 LOXP28300 417 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-209ENST00000539197 IDH2P48735 452 aaKnown RBP1.68□□□□□ -2.14
CCDC7-209ENST00000539197 ACLYP53396 1101 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 RPS23P62266 143 aaKnown RBP1.68□□□□□ -2.14
CCDC7-209ENST00000539197 CYP24A1Q07973 514 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 CUL2Q13617 745 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 MAD2L1BPQ15013 274 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-209ENST00000539197 RBMY1FQ15415 496 aaKnown RBP1.68□□□□□ -2.14
CCDC7-209ENST00000539197 ZNF726P1Q15940 193 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 SSX2Q16385 188 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 PRAMEF20Q5VT98 475 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 CERS6Q6ZMG9 384 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 NANOGNBQ7Z5D8 188 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 ERO1BQ86YB8 467 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 ZNF101Q8IZC7 436 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 SLC35G3Q8N808 338 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 PRELID2Q8N945 189 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 OR10G6Q8NH81 332 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 PHOSPHO2Q8TCD6 241 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 APH1BQ8WW43 257 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 CCDC77Q9BR77 488 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 DHX35Q9H5Z1 703 aaKnown RBP1.68□□□□□ -2.14
CCDC7-209ENST00000539197 CSNK1G1Q9HCP0 422 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 MYOZ1Q9NP98 299 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-209ENST00000539197 MED4Q9NPJ6 270 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 MTFP1Q9UDX5 166 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 SIGLEC7Q9Y286 467 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 CTAGE15A4D2H0 777 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 OR2AG2A6NM03 316 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 SYCE1LA8MT33 242 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 J3QKU1 62 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 CST1P01037 141 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 ASGR1P07306 291 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 EIF2S2P20042 333 aaKnown RBP1.67□□□□□ -2.14
CCDC7-209ENST00000539197 GFERP55789 205 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 ATP5IP56385 69 aaPredicted RBP1.67□□□□□ -2.14
CCDC7-209ENST00000539197 EIF3EP60228 445 aaKnown RBP1.67□□□□□ -2.14
CCDC7-209ENST00000539197 PRR3P79522 188 aaKnown RBP1.67□□□□□ -2.14
CCDC7-209ENST00000539197 ZNF235Q14590 738 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 IHHQ14623 411 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 PSMD5Q16401 504 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 HSP90AB3PQ58FF7 597 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 MED27Q6P2C8 311 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 C16orf47Q6ZP98 133 aaPredicted RBP1.67□□□□□ -2.14
CCDC7-209ENST00000539197 TMEM136Q6ZRR5 245 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 LINC00336Q6ZUF6 198 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 CTAGE6Q86UF2 777 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 SGPP2Q8IWX5 399 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 KCNG3Q8TAE7 436 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 KIFAP3Q92845 792 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 KLF6Q99612 283 aaPredicted RBP1.67□□□□□ -2.14
CCDC7-209ENST00000539197 NUP58Q9BVL2 599 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 CSDC2Q9Y534 153 aaKnown RBP1.67□□□□□ -2.14
CCDC7-209ENST00000539197 DENND4AQ7Z401 1863 aa1.67□□□□□ -2.14
CCDC7-209ENST00000539197 SCN4AP35499 1836 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 IGHV3-72A0A0B4J1Y9 119 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 IGHV1-69DA0A0B4J2H0 117 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 A0A1B0GW55 424 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 HEATR9A2RTY3 570 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 SMKR1H3BMG3 65 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 J3QRE1 110 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 MFNGO00587 321 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 RAD51CO43502 376 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 RNF13O43567 381 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 CNMDO75829 334 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 GATBO75879 557 aaKnown RBP1.66□□□□□ -2.14
CCDC7-209ENST00000539197 TPM2P07951 284 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 DUX4L2P0CJ85 424 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 DUX4L3P0CJ86 424 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 DUX4L5P0CJ88 424 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 DUX4L6P0CJ89 424 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 DUX4L7P0CJ90 424 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 ATF6P18850 670 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 IL32P24001 234 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 RRM2P31350 389 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 SLC1A1P43005 524 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 SYKP43405 635 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 GALR1P47211 349 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 PSMD8P48556 350 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 UBE2E1P51965 193 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 SP4Q02446 784 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 ART3Q13508 389 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 SOHLH1Q5JUK2 328 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 ARMC12Q5T9G4 340 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 C9orf135Q5VTT2 229 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 GUSBP11Q6P575 273 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 PRSS54Q6PEW0 395 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 USP50Q70EL3 339 aaPredicted RBP1.66□□□□□ -2.14
CCDC7-209ENST00000539197 FAM71AQ8IYT1 594 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 NPWQ8N729 165 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 OR52E2Q8NGJ4 325 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 OR51E1Q8TCB6 317 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 SLC2A14Q8TDB8 520 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 RASD2Q96D21 266 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 ECHDC3Q96DC8 303 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 PKIBQ9C010 78 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 DUX4Q9UBX2 424 aa1.66□□□□□ -2.14
CCDC7-209ENST00000539197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.65□□□□□ -2.15
CCDC7-209ENST00000539197 A0A1B0GUH1 482 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms