RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ELMOD2Q8IZ81 293 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 PRSS35Q8N3Z0 413 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 SLITRK2Q9H156 845 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 CDH20Q9HBT6 801 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 ZNF224Q9NZL3 707 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 ZNF391Q9UJN7 358 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 HHLA2Q9UM44 414 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 SF3B6Q9Y3B4 125 aaKnown RBP13.44□□□□□ -0.26
VAMP1-207ENST00000539047 GPX5O75715 221 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 PNPP00491 289 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 LCATP04180 440 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 SERPINA5P05154 406 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 ISG15P05161 165 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 OCM2P0CE71 109 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 PLA2G2AP14555 144 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 CCNOP22674 350 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 APEX1P27695 318 aaKnown RBP13.43□□□□□ -0.26
VAMP1-207ENST00000539047 CRYBB2P43320 205 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 VBP1P61758 197 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 TSC22D1Q15714 1073 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 CTF1Q16619 201 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 ODF4Q2M2E3 257 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 Q499Y3 187 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 ACSM3Q53FZ2 586 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 TIMM23BQ5SRD1 257 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 C22orf42Q6IC83 251 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 UNQ6126/PRO20091Q6UXV3 157 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 STAC2Q6ZMT1 411 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 NCCRP1Q6ZVX7 275 aaPredicted RBP13.43□□□□□ -0.26
VAMP1-207ENST00000539047 CEACAM19Q7Z692 300 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 CCDC54Q8NEL0 328 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 OR13C3Q8NGS6 347 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 FGFBP3Q8TAT2 258 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 ABHD4Q8TB40 342 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 PRR7Q8TB68 274 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 RPL3LQ92901 407 aaKnown RBP13.43□□□□□ -0.26
VAMP1-207ENST00000539047 OR10A4Q9H209 315 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 G6PC2Q9NQR9 355 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 TXNL4BQ9NX01 149 aaKnown RBP13.43□□□□□ -0.26
VAMP1-207ENST00000539047 CKLFQ9UBR5 152 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 DHDHQ9UQ10 334 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
VAMP1-207ENST00000539047 LOC107986453A0A1B0GWG9 222 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 C5orf49A4QMS7 147 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 C16orf97H3BN30 126 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 SYT7O43581 403 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 ACSM4P0C7M7 580 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 SLC2A1P11166 492 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 CBR1P16152 277 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 CFL1P23528 166 aaKnown RBP13.42□□□□□ -0.26
VAMP1-207ENST00000539047 SERPINB10P48595 397 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 IDH3GP51553 393 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-207ENST00000539047 NCS1P62166 190 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 MALLQ13021 153 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 GFOD2Q3B7J2 385 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 C4orf17Q53FE4 359 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 RELL2Q8NC24 303 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-207ENST00000539047 SLC30A7Q8NEW0 376 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 IL17RDQ8NFM7 739 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 OR8B12Q8NGG6 310 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 CENPOQ9BU64 300 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 ACTR6Q9GZN1 396 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 RGCCQ9H4X1 137 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 PLEKHA1Q9HB21 404 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 B3GNT2Q9NY97 397 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 EIF3KQ9UBQ5 218 aaKnown RBP13.42□□□□□ -0.26
VAMP1-207ENST00000539047 ERRFI1Q9UJM3 462 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-207ENST00000539047 COL6A6A6NMZ7 2263 aa13.42□□□□□ -0.26
VAMP1-207ENST00000539047 A0A0U1RQV5 110 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 XRCC2O43543 280 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 MTRF1O75570 445 aaKnown RBP13.41□□□□□ -0.26
VAMP1-207ENST00000539047 TTRP02766 147 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 DBHP09172 617 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 PPP3CBP16298 524 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 ZNF20P17024 532 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 SOX6P35712 828 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 PPA1Q15181 289 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 CNPY1Q3B7I2 92 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 HSD17B12Q53GQ0 312 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 ZMAT1Q5H9K5 638 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 DOK3Q7L591 496 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 CPEB3Q8NE35 698 aaKnown RBP13.41□□□□□ -0.26
VAMP1-207ENST00000539047 OR5L1Q8NGL2 311 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 CA5BP1Q8WTZ4 195 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 SLC7A6Q92536 515 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 AKAP1Q92667 903 aaKnown RBP eCLIP13.41□□□□□ -0.26
VAMP1-207ENST00000539047 APOBEC3DQ96AK3 386 aaPredicted RBP13.41□□□□□ -0.26
VAMP1-207ENST00000539047 S100PBPQ96BU1 408 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 OR14A2Q96R54 314 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 KCNS3Q9BQ31 491 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 DCSTAMPQ9H295 470 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 NOX3Q9HBY0 568 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 PTTG2Q9NZH5 202 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 JKAMPQ9P055 326 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 SPTA1P02549 2419 aa13.41□□□□□ -0.26
VAMP1-207ENST00000539047 A0A1W2PR80 420 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 ZNF503-AS2A6NEH8 195 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 FAM90A27PA6NNH2 459 aa13.4□□□□□ -0.26
VAMP1-207ENST00000539047 B8ZZF3 427 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms