RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 MS4A3Q96HJ5 214 aa12.3□□□□□ -0.44
CD4-208ENST00000538827 PDCD1LG2Q9BQ51 273 aa12.3□□□□□ -0.44
CD4-208ENST00000538827 HDHD5Q9BXW7 423 aa12.3□□□□□ -0.44
CD4-208ENST00000538827 PBOV1Q9GZY1 135 aa12.3□□□□□ -0.44
CD4-208ENST00000538827 OBP2BQ9NPH6 170 aa12.3□□□□□ -0.44
CD4-208ENST00000538827 B3GNT2Q9NY97 397 aa12.3□□□□□ -0.44
CD4-208ENST00000538827 SLC22A13Q9Y226 551 aa12.3□□□□□ -0.44
CD4-208ENST00000538827 SMIM31A0A1B0GVY4 71 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 C5orf49A4QMS7 147 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 WIPF3A6NGB9 483 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 C16orf97H3BN30 126 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 H3BSA7 217 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 OGG1O15527 345 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 SRSF10O75494 262 aaKnown RBP12.29□□□□□ -0.44
CD4-208ENST00000538827 RGS9O75916 674 aaPredicted RBP12.29□□□□□ -0.44
CD4-208ENST00000538827 APOC1P02654 83 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 ACSM4P0C7M7 580 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 CCL2P13500 99 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 STOMP27105 288 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 GABRA5P31644 462 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 UGT2B10P36537 528 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 ZNF83P51522 516 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 LSM3P62310 102 aaKnown RBP12.29□□□□□ -0.44
CD4-208ENST00000538827 HGFACQ04756 655 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 PPA1Q15181 289 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 TBC1D28Q2M2D7 210 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 TIMM23BQ5SRD1 257 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 DMKNQ6E0U4 476 aaPredicted RBP12.29□□□□□ -0.44
CD4-208ENST00000538827 RHOUQ7L0Q8 258 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 CPEB3Q8NE35 698 aaKnown RBP12.29□□□□□ -0.44
CD4-208ENST00000538827 SLC30A7Q8NEW0 376 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 OR8B12Q8NGG6 310 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 TSEN15Q8WW01 171 aaKnown RBP12.29□□□□□ -0.44
CD4-208ENST00000538827 PPP1R14AQ96A00 147 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
CD4-208ENST00000538827 MUCL1Q96DR8 90 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 LRRC46Q96FV0 321 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
CD4-208ENST00000538827 CHCHD6Q9BRQ6 235 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 OR51E2Q9H255 320 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 CDH20Q9HBT6 801 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 FRRS1LQ9P0K9 344 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 ATPIF1Q9UII2 106 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 ENPP5Q9UJA9 477 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 STUB1Q9UNE7 303 aa12.29□□□□□ -0.44
CD4-208ENST00000538827 DIDO1Q9BTC0 2240 aaKnown RBP12.28□□□□□ -0.44
CD4-208ENST00000538827 TMEM212A6NML5 194 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 M0R1B8 84 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 P2RY10O00398 339 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 PLPP2O43688 288 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 AIREO43918 545 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 ZG16O60844 167 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 CLDN1O95832 211 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 LCATP04180 440 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 RNF224P0DH78 156 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 COX5BP10606 129 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 GRNP28799 593 aaKnown RBP12.28□□□□□ -0.44
CD4-208ENST00000538827 DCTDP32321 178 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 TAB1Q15750 504 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 TIMM50Q3ZCQ8 353 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 FDX2Q6P4F2 183 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 DRAM2Q6UX65 266 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 MYPOPQ86VE0 399 aaPredicted RBP12.28□□□□□ -0.44
CD4-208ENST00000538827 WFDC8Q8IUA0 241 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 EGFL6Q8IUX8 553 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 GHSRQ92847 366 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 RPL3LQ92901 407 aaKnown RBP12.28□□□□□ -0.44
CD4-208ENST00000538827 PGLYRP3Q96LB9 341 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 G6PC2Q9NQR9 355 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 SSR3Q9UNL2 185 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 SLC25A15Q9Y619 301 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 CEPT1Q9Y6K0 416 aa12.28□□□□□ -0.44
CD4-208ENST00000538827 NF1P21359 2839 aa12.27□□□□□ -0.44
CD4-208ENST00000538827 LOC100509620A0A075B734 347 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 LOC107986453A0A1B0GWG9 222 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 OR4C45A6NMZ5 311 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 GPRIN2O60269 458 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 ZFPL1O95159 310 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 SERPINA5P05154 406 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 UBCP0CG48 685 aaKnown RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 CBR1P16152 277 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 ZNF14P17017 642 aaPredicted RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 PSMA1P25786 263 aaKnown RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 MMP16P51512 607 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 CCR9P51686 369 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 ZNF704Q6ZNC4 412 aaPredicted RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 NAA40Q86UY6 237 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 ANKRD13BQ86YJ7 626 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 ZNF584Q8IVC4 421 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 IL17RDQ8NFM7 739 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 OR1J2Q8NGS2 313 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 LILRB4Q8NHJ6 448 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 RPS4Y2Q8TD47 263 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 RNASE6Q93091 150 aaKnown RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 ISOC1Q96CN7 298 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 BOD1Q96IK1 185 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 RBM38Q9H0Z9 239 aaKnown RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 OR10A2Q9H208 303 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms