RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 KCNAB3O43448 404 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 HIST1H1CP16403 213 aaKnown RBP13.94□□□□□ -0.18
PTPN6-210ENST00000538318 SLC6A6P31641 620 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 CD200P41217 278 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 PRSS12P56730 875 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 DBPQ10586 325 aaPredicted RBP13.94□□□□□ -0.18
PTPN6-210ENST00000538318 KRT72Q14CN4 511 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 DCDC5Q6ZRR9 648 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 JAZF1Q86VZ6 243 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 LINC00346Q8IVM7 164 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 FITM2Q8N6M3 262 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 OR4K13Q8NH42 304 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 FANK1Q8TC84 345 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 PITX2Q99697 317 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 ATF6BQ99941 703 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 NUDT16L1Q9BRJ7 211 aaKnown RBP13.94□□□□□ -0.18
PTPN6-210ENST00000538318 PRDM13Q9H4Q3 707 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 SPAG4Q9NPE6 437 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 PNRC2Q9NPJ4 139 aaKnown RBP13.94□□□□□ -0.18
PTPN6-210ENST00000538318 RPRD1BQ9NQG5 326 aaKnown RBP13.94□□□□□ -0.18
PTPN6-210ENST00000538318 CLN8Q9UBY8 286 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 CYB5R1Q9UHQ9 305 aa13.94□□□□□ -0.18
PTPN6-210ENST00000538318 PHYHO14832 338 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 RENP00797 406 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 SEMG1P04279 462 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 IRF2P14316 349 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 GGT2P36268 569 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 RAD23AP54725 363 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 SMIM11AP58511 58 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 TRAP1Q12931 704 aaKnown RBP13.93□□□□□ -0.18
PTPN6-210ENST00000538318 SLC36A3Q495N2 470 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 WDR25Q64LD2 544 aaPredicted RBP13.93□□□□□ -0.18
PTPN6-210ENST00000538318 C16orf87Q6PH81 154 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 LYPD2Q6UXB3 125 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 ZNF841Q6ZN19 808 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 NAA40Q86UY6 237 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 OR2AJ1Q8NGZ0 328 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 CMTM5Q96DZ9 223 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 CDADC1Q9BWV3 514 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 SLITRK2Q9H156 845 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 GORASP2Q9H8Y8 452 aa13.93□□□□□ -0.18
PTPN6-210ENST00000538318 OR6C68A6NDL8 312 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 GADD45GO95257 159 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 LCATP04180 440 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 PSMB10P40306 273 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 BPIFB3P59826 476 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 MALLQ13021 153 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 CLEC12AQ5QGZ9 265 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 PGAP1Q75T13 922 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 OR10S1Q8NGN2 331 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 OR11L1Q8NGX0 322 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 TAF15Q92804 592 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPN6-210ENST00000538318 SLCO4A1Q96BD0 722 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 IFT27Q9BW83 186 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 MYLK2Q9H1R3 596 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 ZNF446Q9NWS9 450 aa13.92□□□□□ -0.18
PTPN6-210ENST00000538318 MDFIC2A0A1B0GVS7 189 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 IDH3BO43837 385 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 FAM20BO75063 409 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 GMNNO75496 209 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 NOS3P29474 1203 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 NPY4RP50391 375 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 TPTEP56180 551 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 SPIBQ01892 262 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 MPPED2Q15777 294 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 TREML4Q6UXN2 200 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 BRD3OSQ6XYD6 125 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 RNF148Q8N7C7 305 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 TMIGD2Q96BF3 282 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 PYURFQ96I23 114 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 MAP6Q96JE9 813 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 SLC22A4Q9H015 551 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 MRPL22Q9NWU5 206 aaKnown RBP13.91□□□□□ -0.18
PTPN6-210ENST00000538318 ADA2Q9NZK5 511 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 KCNG2Q9UJ96 466 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 MMP24Q9Y5R2 645 aa13.91□□□□□ -0.18
PTPN6-210ENST00000538318 C22orf46C9J442 243 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 M0R135 149 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 HOXA3O43365 443 aaPredicted RBP13.9□□□□□ -0.18
PTPN6-210ENST00000538318 OR10H3O60404 316 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 PTBP3O95758 552 aaKnown RBP13.9□□□□□ -0.18
PTPN6-210ENST00000538318 HLA-DQA2P01906 255 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 MDKP21741 143 aaPredicted RBP13.9□□□□□ -0.18
PTPN6-210ENST00000538318 GSSP48637 474 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 FGF12P61328 243 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 DEFB112Q30KQ8 113 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 PRAMEF6Q5VXH4 476 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 C19orf18Q8NEA5 215 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 SDR9C7Q8NEX9 313 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 SPRYD4Q8WW59 207 aaPredicted RBP13.9□□□□□ -0.18
PTPN6-210ENST00000538318 ZNF799Q96GE5 643 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 FN3KQ9H479 309 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 UFSP2Q9NUQ7 469 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 TMCC3Q9ULS5 477 aa13.9□□□□□ -0.18
PTPN6-210ENST00000538318 NOP16Q9Y3C1 178 aaKnown RBP13.9□□□□□ -0.18
PTPN6-210ENST00000538318 CD300LBA8K4G0 201 aa13.89□□□□□ -0.19
PTPN6-210ENST00000538318 SRRM5B3KS81 715 aa13.89□□□□□ -0.19
PTPN6-210ENST00000538318 ENSAO43768 121 aaKnown RBP13.89□□□□□ -0.19
PTPN6-210ENST00000538318 GMDSO60547 372 aa13.89□□□□□ -0.19
PTPN6-210ENST00000538318 CA6P23280 308 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms