RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ALX3O95076 343 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 RAB3DO95716 219 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 CELA2AP08217 269 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 GSTP1P09211 210 aaKnown RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 TMIGD3P0DMS9 266 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 TCN2P20062 427 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 ENPP1P22413 925 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 TCEA1P23193 301 aaKnown RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 MPZP25189 248 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 OTX2P32243 289 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 ZNF93P35789 620 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 CYB561P49447 251 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 EFNB2P52799 333 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 ZNF121P58317 390 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 RAC3P60763 192 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 MRPS34P82930 218 aaKnown RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 C19orf57Q0VDD7 668 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 INPP5JQ15735 1006 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 MPPED2Q15777 294 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 CARD17Q5XLA6 110 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 AWAT2Q6E213 333 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 RTL6Q6ICC9 239 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 LPCAT3Q6P1A2 487 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 MTFR2Q6P444 385 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 SEZ6L2Q6UXD5 910 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 ABHD12BQ7Z5M8 362 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 LYPD6Q86Y78 171 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 TMEM123Q8N131 208 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 GABRG1Q8N1C3 465 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 CLEC1AQ8NC01 280 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 OR8B12Q8NGG6 310 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 OR10S1Q8NGN2 331 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 OR5M1Q8NGP8 315 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 OR1J2Q8NGS2 313 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 KCNG3Q8TAE7 436 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 OR51E1Q8TCB6 317 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 CT55Q8WUE5 264 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 PP6455Q8WZ26 134 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 PGAM5Q96HS1 289 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 JSRP1Q96MG2 331 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 GPR137Q96N19 417 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 CDC6Q99741 560 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 PRRT1Q99946 306 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 URM1Q9BTM9 101 aaKnown RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 TMPRSS13Q9BYE2 586 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 ULBP2Q9BZM5 246 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 ALX4Q9H161 411 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 EXO5Q9H790 373 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 PROK2Q9HC23 129 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 ZFP64Q9NPA5 681 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 IFT46Q9NQC8 304 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 NPDC1Q9NQX5 325 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 DLL4Q9NR61 685 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 PLSCR3Q9NRY6 295 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 SLC2A8Q9NY64 477 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 MRPL15Q9P015 296 aaKnown RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 MGAT4CQ9UBM8 478 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 B4GALT7Q9UBV7 327 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 ZNF69Q9UC07 566 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 CGGBP1Q9UFW8 167 aaPredicted RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 ZNF391Q9UJN7 358 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 MGAT4AQ9UM21 535 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 FARSAQ9Y285 508 aaKnown RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 PLEKHA6Q9Y2H5 1048 aa5.87□□□□□ -1.47
USP28-206ENST00000538224 MRPS18BQ9Y676 258 aaKnown RBP5.87□□□□□ -1.47
USP28-206ENST00000538224 CACNA1CQ13936 2221 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 KMT2EQ8IZD2 1858 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 A0A1B0GTI1 187 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 TEX51A0A1B0GUA7 166 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 TMEM14DPA8MWL7 114 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 FAM25EA8MYX2 175 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 ZNF814B7Z6K7 855 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 ZIC3O60481 467 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 KDM4BO94953 1096 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 IFNA7P01567 189 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 CD74P04233 296 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 RLN1P04808 185 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 TPOP07202 933 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 SP9P0CG40 484 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 CXCL3P19876 107 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 CBX5P45973 191 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 PRKXP51817 358 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 GMFBP60983 142 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 PCBD1P61457 104 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 HIST1H3AP68431 136 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 DHODHQ02127 395 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 SCRN3Q0VDG4 424 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 GK2Q14410 553 aaPredicted RBP5.86□□□□□ -1.47
USP28-206ENST00000538224 RAB35Q15286 201 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 STK11Q15831 433 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 SGCAQ16586 387 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 PNLIPRP3Q17RR3 467 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 RNASE10Q5GAN6 216 aaKnown RBP5.86□□□□□ -1.47
USP28-206ENST00000538224 TMEM255AQ5JRV8 349 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 ACER2Q5QJU3 275 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 RIPPLY2Q5TAB7 128 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 HIST2H3PS2Q5TEC6 136 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 STPG1Q5TH74 334 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 OTPQ5XKR4 325 aa5.86□□□□□ -1.47
USP28-206ENST00000538224 ABLIM2Q6H8Q1 611 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms