RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CHN2P52757 468 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 SEC61A1P61619 476 aaKnown RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 CDK5R2Q13319 367 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 HNF4GQ14541 408 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ZNF808Q8N4W9 903 aaPredicted RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 LSMEM1Q8N8F7 131 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 OR6K3Q8NGY3 331 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 TMEM163Q8TC26 289 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 REEP6Q96HR9 211 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 MGLLQ99685 303 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 TMEM43Q9BTV4 400 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ZDHHC11Q9H8X9 412 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 TP53BP1Q12888 1972 aaPredicted RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 ZNF878C9JN71 531 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 SIRPB1O00241 398 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ZNF81P51508 661 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 TNFAIP6P98066 277 aaPredicted RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 AWAT2Q6E213 333 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 C5orf46Q6UWT4 87 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 SLC25A26Q70HW3 274 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 P2RY8Q86VZ1 359 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 SVOPQ8N4V2 548 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 CAPSLQ8WWF8 208 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 HOXB13Q92826 284 aaPredicted RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 GHSRQ92847 366 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 OR14A2Q96R54 314 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 PCGF1Q9BSM1 259 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 SOX7Q9BT81 388 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 RSPO3Q9BXY4 272 aaPredicted RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 EGLN1Q9GZT9 426 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ADAM19Q9H013 955 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 NELFAQ9H3P2 528 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 CA10Q9NS85 328 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 NDRG4Q9ULP0 352 aaKnown RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 WASF3Q9UPY6 502 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 DSCAMO60469 2012 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ZNF432O94892 652 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 TNFAIP8O95379 198 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 RNF224P0DH78 156 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 COX7A1P24310 79 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 NTF4P34130 210 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 RBM34P42696 430 aaKnown RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 GZMMP51124 257 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 GFRA1P56159 465 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 VBP1P61758 197 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ZNF829Q3KNS6 432 aaPredicted RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 ELFN2Q5R3F8 820 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 METTL11BQ5VVY1 283 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ZNF782Q6ZMW2 699 aaPredicted RBP6.32□□□□□ -1.4
MSH6-209ENST00000538136 SLC16A9Q7RTY1 509 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ENTHD1Q8IYW4 607 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ZNRF4Q8WWF5 429 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 PTP4A1Q93096 173 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 CMC2Q9NRP2 79 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 FAIMQ9NVQ4 179 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 KLHL21Q9UJP4 597 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 SESN1Q9Y6P5 492 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 AIREO43918 545 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 GLCEO94923 617 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 PMS2P2O95744 297 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 CAPNS1P04632 268 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 ASCL1P50553 236 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 HFEQ30201 348 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TMEM81Q6P7N7 255 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 CFAP77Q6ZQR2 320 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 FAM185AQ8N0U4 392 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 OR6S1Q8NH40 331 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 RNF128Q8TEB7 428 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 SFXN3Q9BWM7 321 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
MSH6-209ENST00000538136 OR52A1Q9UKL2 312 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 A0A087WXM4 84 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 ZNF732B4DXR9 585 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 SLC1A7O00341 560 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 DKK1O94907 266 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TGFAP01135 160 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 PTHP01270 115 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 DCKP27707 260 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TALDO1P37837 337 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TSPAN5P62079 268 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 BEX5Q5H9J7 111 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 FAM205BPQ63HN1 556 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 ZNF57Q68EA5 555 aaPredicted RBP6.31□□□□□ -1.4
MSH6-209ENST00000538136 XAF1Q6GPH4 301 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 RFPL4BQ6ZWI9 263 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TSEN54Q7Z6J9 526 aaKnown RBP6.31□□□□□ -1.4
MSH6-209ENST00000538136 FADS6Q8N9I5 356 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 LILRB4Q8NHJ6 448 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 RPL3LQ92901 407 aaKnown RBP6.31□□□□□ -1.4
MSH6-209ENST00000538136 C4orf45Q96LM5 186 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 HINT2Q9BX68 163 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 POLE4Q9NR33 117 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 LRCH1Q9Y2L9 728 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 IDH3BO43837 385 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 SMPD2O60906 423 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 MTRF1O75570 445 aaKnown RBP6.31□□□□□ -1.4
MSH6-209ENST00000538136 GLRA1P23415 457 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 SERPINF1P36955 418 aa6.31□□□□□ -1.4
MSH6-209ENST00000538136 TGFBR2P37173 567 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms