RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ZIC3O60481 467 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 RAB40ALP0C0E4 278 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 TMIGD3P0DMS9 266 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 LIFP15018 202 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 ADRA2CP18825 462 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 DPP4P27487 766 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 EIF1P41567 113 aaKnown RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 SOX2P48431 317 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 PTH2RP49190 550 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 UBE2MP61081 183 aaKnown RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 GLO1Q04760 184 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 PLA2G7Q13093 441 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 EIF2B1Q14232 305 aaKnown RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF239Q16600 458 aaKnown RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 C2orf68Q2NKX9 166 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 TMEM176BQ3YBM2 270 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 KRTCAP3Q53RY4 240 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 GLDNQ6ZMI3 551 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 LRRTM1Q86UE6 522 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 GTPBP8Q8N3Z3 284 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 OR6M1Q8NGM8 313 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 COQ8AQ8NI60 647 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 LHFPL5Q8TAF8 219 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 ZBTB8AQ96BR9 441 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 EAF1Q96JC9 268 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 DDA1Q9BW61 102 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 FARSAQ9Y285 508 aaKnown RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 A0A087WZY1 265 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 A0A1B0GUH1 482 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 TMEM212A6NML5 194 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 ATP6V1G2-DDX39BF2Z307 99 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 H3BSH0 61 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 TRAF3IP2O43734 574 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 SRSF10O75494 262 aaKnown RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 FCER2P06734 321 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 LPLP06858 475 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 NMBP08949 121 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 CD63P08962 238 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 PRKACAP17612 351 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 SFTPDP35247 375 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 PSMA6P60900 246 aaKnown RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 MFGE8Q08431 387 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 CHAF1BQ13112 559 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 ZMYND11Q15326 602 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 CSRP2Q16527 193 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 ODF4Q2M2E3 257 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 STAC2Q6ZMT1 411 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 STPG2Q8N412 459 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF676Q8N7Q3 588 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 SYNPRQ8TBG9 265 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 PPA2Q9H2U2 334 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 FOXJ2Q9P0K8 574 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 SLC22A13Q9Y226 551 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 MCRIP1C9JLW8 97 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 GABARAPH6UMI1 98 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 PDCD5O14737 125 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 KRT33AO76009 404 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 ECDO95905 644 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 NFYAP23511 347 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 SSTP61278 116 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 RASGEF1BQ0VAM2 473 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 B3GNTL1Q67FW5 361 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 RGS7BPQ6MZT1 257 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 H3F3CQ6NXT2 135 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 DND1Q8IYX4 353 aaKnown RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 TMEM156Q8N614 296 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 DNAAF1Q8NEP3 725 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 OR52N5Q8NH56 324 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 ST7LQ8TDW4 575 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 SLC25A43Q8WUT9 341 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 ST8SIA4Q92187 359 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-210ENST00000538120 PLEKHA1Q9HB21 404 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 PLSCR4Q9NRQ2 329 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 KLHL9Q9P2J3 617 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 OR5V1Q9UGF6 321 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 KIF25Q9UIL4 384 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 HDGFL3Q9Y3E1 203 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 LRP12Q9Y561 859 aa9.54□□□□□ -0.88
CLIP1-210ENST00000538120 TRAV8-7A0A075B6U6 113 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 AIPO00170 330 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 ARPC5O15511 151 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 JMJD7P0C870 316 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 ZP3P21754 424 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 CDK2P24941 298 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 OR7E24Q6IFN5 339 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 DNM1P34Q6PK57 102 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 LINC00346Q8IVM7 164 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 UEVLDQ8IX04 471 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF565Q8N9K5 539 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 GPR148Q8TDV2 347 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 FCAMRQ8WWV6 532 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 MCHR2Q969V1 340 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 MIB2Q96AX9 1013 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 FOXJ3Q9UPW0 622 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 V9GY05 133 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 A0A0G2JMM0 328 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 A0A1W2PPB8 328 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 A0A1W2PRS3 328 aa9.53□□□□□ -0.88
CLIP1-210ENST00000538120 ANKRD20A5PA0PJZ0 165 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms