RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SEC22AQ96IW7 307 aa7.37□□□□□ -1.23
ABCA4-207ENST00000536513 RBP7Q96R05 134 aa7.37□□□□□ -1.23
ABCA4-207ENST00000536513 TMEM231Q9H6L2 316 aa7.37□□□□□ -1.23
ABCA4-207ENST00000536513 VSX1Q9NZR4 365 aaPredicted RBP7.37□□□□□ -1.23
ABCA4-207ENST00000536513 SLC22A31A6NKX4 558 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 EEF1E1-BLOC1S5C9J1V9 151 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 NTN3O00634 580 aaPredicted RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 FADS1O60427 444 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 TSPAN2O60636 221 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SC5DO75845 299 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 RBBP9O75884 186 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CLPSP04118 112 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 PPP3CBP16298 524 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 LIMS1P48059 325 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ST3GAL2Q16842 350 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ACSM3Q53FZ2 586 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 AVPI1Q5T686 147 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 TMUB2Q71RG4 321 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SLC35F2Q8IXU6 374 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ZNF440Q8IYI8 595 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 OR5T2Q8NGG2 359 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CD300LFQ8TDQ1 290 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 INTS12Q96CB8 462 aaKnown RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 WDFY2Q96P53 400 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SPACA5Q96QH8 159 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CMSS1Q9BQ75 279 aaKnown RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 NXF2Q9GZY0 626 aaKnown RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 LAT2Q9GZY6 243 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ICAM5Q9UMF0 924 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 PCDHGA5Q9Y5G8 931 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 INTS1Q8N201 2190 aaKnown RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 WNK2Q9Y3S1 2297 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 TRAV36DV7A0A075B6V5 113 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 IGHV1-45A0A0A0MS14 117 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 BLACEA4D250 179 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 OR6C65A6NJZ3 312 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 EIF4EP06730 217 aaKnown RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 PNLIPP16233 465 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SPI1P17947 270 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SLC6A8P48029 635 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 LUMP51884 338 aaPredicted RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CDK5Q00535 292 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 RAB40BQ12829 278 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 OR1C1Q15619 314 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 H3F3CQ6NXT2 135 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 NIPAL3Q6P499 406 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ZNF322Q6U7Q0 402 aaPredicted RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ZNF704Q6ZNC4 412 aaPredicted RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ZNF627Q7L945 461 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SSX9Q7RTT3 188 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ASCL5Q7RTU5 278 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 PPP1R32Q7Z5V6 425 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CNEP1R1Q8N9A8 125 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CHST4Q8NCG5 386 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 DNAAF1Q8NEP3 725 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 OR4D10Q8NGI6 311 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 OR10Z1Q8NGY1 313 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 MRPL48Q96GC5 212 aaKnown RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CLUHP3Q96NS8 147 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SIGLEC12Q96PQ1 595 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 C20orf85Q9H1P6 137 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 RPS10P5Q9NQ39 176 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ASH2LQ9UBL3 628 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 GTF3C1Q12789 2109 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 IGKV1D-42A0A075B6H8 117 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 OR2M5A3KFT3 312 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 FAM74A7A6NL05 159 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 GOSR1O95249 250 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 HOXD4P09016 255 aaPredicted RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ACP1P24666 158 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CD96P40200 585 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 EIF2S3P41091 472 aaKnown RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 MAGEA5P43359 124 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 PRPS1P60891 318 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 DOC2BQ14184 412 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 EIF2B1Q14232 305 aaKnown RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 PEA15Q15121 130 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 FAM74A3Q4VXF1 159 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 DCAF10Q5QP82 559 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SHEQ5VZ18 495 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 SFXN4Q6P4A7 337 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 BEND4Q6ZU67 534 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 ATG4DQ86TL0 474 aaPredicted RBP7.36□□□□□ -1.23
ABCA4-207ENST00000536513 OR6V1Q8N148 313 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 BMPERQ8N8U9 685 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 DUSP18Q8NEJ0 188 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 C17orf47Q8NEP4 570 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 TCTEX1D2Q8WW35 142 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 GHSRQ92847 366 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 RNF32Q9H0A6 362 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 HRH4Q9H3N8 390 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 DLL4Q9NR61 685 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 CAMK2AQ9UQM7 478 aa7.36□□□□□ -1.23
ABCA4-207ENST00000536513 PTPN13Q12923 2485 aa7.35□□□□□ -1.23
ABCA4-207ENST00000536513 H3BMH7 237 aa7.35□□□□□ -1.23
ABCA4-207ENST00000536513 LANCL1O43813 399 aa7.35□□□□□ -1.23
ABCA4-207ENST00000536513 IFNA6P05013 189 aa7.35□□□□□ -1.23
ABCA4-207ENST00000536513 SBK2P0C263 348 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms