RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KLHL12Q53G59 568 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 PARP8Q8N3A8 854 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 BHLHE23Q8NDY6 225 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 OR2Z1Q8NG97 314 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 OR10AD1Q8NGE0 317 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 OR6N2Q8NGY6 317 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 OR2AE1Q8NHA4 323 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 PYDC1Q8WXC3 89 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 CCL17Q92583 94 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 ELMOD3Q96FG2 381 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 COG8Q96MW5 612 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 INTS14Q96SY0 518 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 COPS4Q9BT78 406 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 MARCH7Q9H992 704 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 CENPMQ9NSP4 180 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 TVP23BQ9NYZ1 205 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 CGGBP1Q9UFW8 167 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-206ENST00000536429 KLHDC2Q9Y2U9 406 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 MALRD1Q5VYJ5 2156 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 YLPM1P49750 1951 aaKnown RBP11.15□□□□□ -0.62
PRKDC-206ENST00000536429 IGHV3-64DA0A0J9YX35 117 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 FAM157AC9JC47 383 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 PRKYO43930 277 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 PAICSP22234 425 aaKnown RBP11.14□□□□□ -0.63
PRKDC-206ENST00000536429 SLC2A5P22732 501 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 SLC6A9P48067 706 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 EIF2B1Q14232 305 aaKnown RBP11.14□□□□□ -0.63
PRKDC-206ENST00000536429 PTGES3Q15185 160 aaKnown RBP11.14□□□□□ -0.63
PRKDC-206ENST00000536429 SNAPC1Q16533 368 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 IL17RELQ6ZVW7 336 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 BCDIN3DQ7Z5W3 292 aaKnown RBP11.14□□□□□ -0.63
PRKDC-206ENST00000536429 HIPK1Q86Z02 1210 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 OR5L1Q8NGL2 311 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 ITLN1Q8WWA0 313 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 SPTSSAQ969W0 71 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 ABHD6Q9BV23 337 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 GABARAPL1Q9H0R8 117 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 TMEFF2Q9UIK5 374 aaPredicted RBP11.14□□□□□ -0.63
PRKDC-206ENST00000536429 ZDHHC8Q9ULC8 765 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 WIPI2Q9Y4P8 454 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 N6AMT1Q9Y5N5 214 aa11.14□□□□□ -0.63
PRKDC-206ENST00000536429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.14□□□□□ -0.634e-11■■■■■ 41.7
PRKDC-206ENST00000536429 CCDC182A6NF36 153 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 KIAA1324LA8MWY0 1029 aaPredicted RBP11.13□□□□□ -0.63
PRKDC-206ENST00000536429 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 H3BNX3 289 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 MLNRO43193 412 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 LMX1BO60663 402 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 TGFAP01135 160 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 POLR2IP36954 125 aaKnown RBP11.13□□□□□ -0.63
PRKDC-206ENST00000536429 NAA10P41227 235 aaPredicted RBP11.13□□□□□ -0.63
PRKDC-206ENST00000536429 BLVRAP53004 296 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 HCCSP53701 268 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 CDH15P55291 814 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 ACTR3P61158 418 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 LMO4P61968 165 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF92Q03936 586 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 HFEQ30201 348 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 ZMAT1Q5H9K5 638 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 GLYATL3Q5SZD4 288 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF771Q7L3S4 317 aaPredicted RBP11.13□□□□□ -0.63
PRKDC-206ENST00000536429 CXXC5Q7LFL8 322 aaKnown RBP11.13□□□□□ -0.63
PRKDC-206ENST00000536429 ZDHHC13Q8IUH4 622 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 OR8G5Q8NG78 346 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 DNAJC9Q8WXX5 260 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 HPS1Q92902 700 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 OR2V2Q96R30 315 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 DIRC2Q96SL1 478 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 KCNJ15Q99712 375 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 PKP2Q99959 881 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 SLC30A2Q9BRI3 323 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 EGLN1Q9GZT9 426 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 LPAR2Q9HBW0 351 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 KRT84Q9NSB2 600 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 OAZ3Q9UMX2 235 aa11.13□□□□□ -0.63
PRKDC-206ENST00000536429 SAC3D1A6NKF1 404 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 ZAR1LA6NP61 321 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 CLDN25C9JDP6 229 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF878C9JN71 531 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 F5H5P2 479 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 HLA-DPB1P04440 258 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 FCGR1AP12314 374 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 SELEP16581 610 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 OPRL1P41146 370 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 ESRRGP62508 458 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 APOFQ13790 326 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 TAF13Q15543 124 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 KRTAP21-3Q3LHN1 58 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 FAM166AQ6J272 317 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 DRAM2Q6UX65 266 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF283Q8N7M2 679 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 LINC01356Q8N9X3 169 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 RNF133Q8WVZ7 376 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 PLEKHA8Q96JA3 519 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF582Q96NG8 517 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-206ENST00000536429 CIB1Q99828 191 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 DNAJC27Q9NZQ0 273 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 KCNS2Q9ULS6 477 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms