RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 WDR76Q9H967 626 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 C14orf119Q9NWQ9 140 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 ABCD2Q9UBJ2 740 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 TRAV38-1A0A0B4J264 116 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 TRBV4-1A0A0J9YWV2 114 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 hCG_1807616A0A1W2PRN6 198 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 ANKRD30BLA7E2S9 258 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 F5H0A9 414 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 TRAPPC2LH3BP13 241 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 CLDN34H7C241 214 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 M0R135 149 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF205O95201 554 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 GPANK1O95872 356 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 FSHBP01225 129 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 IFNGP01579 166 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 APOC1P02654 83 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 CDKN2AP42771 156 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 SLC15A1P46059 708 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 SEC61A1P61619 476 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 PAX8Q06710 450 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 FHL1Q13642 323 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 SNCBQ16143 134 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 MEP1BQ16820 701 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF404Q494X3 552 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 TMEM255AQ5JRV8 349 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF362Q5T0B9 420 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 METTL11BQ5VVY1 283 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 OTPQ5XKR4 325 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 CORO6Q6QEF8 472 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 C16orf89Q6UX73 402 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 PTCHD4Q6ZW05 846 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 LINC00346Q8IVM7 164 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 FTMTQ8N4E7 242 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 FAM86B1Q8N7N1 296 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 BOLLQ8N9W6 283 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 OR8S1Q8NH09 359 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF799Q96GE5 643 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 SIGLEC11Q96RL6 698 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 ELAC2Q9BQ52 826 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 ADAT1Q9BUB4 502 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 TMEM165Q9HC07 324 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 DCAF16Q9NXF7 216 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 RNF7Q9UBF6 113 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 NBEAL1Q6ZS30 2694 aa11.11□□□□□ -0.63
CLSTN3-205ENST00000535452 IGHV3OR16-10A0A075B7F0 116 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 IGHV3-64DA0A0J9YX35 117 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 GMDSO60547 372 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 DIRAS1O95057 198 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 HLA-DPB1P04440 258 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 HIST1H1CP16403 213 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 HSD11B1P28845 292 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 GATA4P43694 442 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 MNAT1P51948 309 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 BLVRAP53004 296 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 GK2Q14410 553 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 SPRNQ5BIV9 151 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 SLC18B1Q6NT16 456 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 DRAM2Q6UX65 266 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 TSEN54Q7Z6J9 526 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 OR6V1Q8N148 313 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 RNF148Q8N7C7 305 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 PLPP7Q8NBV4 271 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 SDR9C7Q8NEX9 313 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 SLC26A10Q8NG04 563 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 OR4F5Q8NH21 305 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 DVL3Q92997 716 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 UPRTQ96BW1 309 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 FAM71F1Q96KD3 344 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 TSSK2Q96PF2 358 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 TMEM246Q9BRR3 403 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 PCGF1Q9BSM1 259 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 C1QTNF5Q9BXJ0 243 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 UNKLQ9H9P5 680 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 BEX1Q9HBH7 125 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 ESM1Q9NQ30 184 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 UFSP2Q9NUQ7 469 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 TBC1D23Q9NUY8 699 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 N6AMT1Q9Y5N5 214 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 LHFPL6Q9Y693 200 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 DYSFO75923 2080 aa11.1□□□□□ -0.63
CLSTN3-205ENST00000535452 TANC2Q9HCD6 1990 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 KIR2DS1A0A191URI9 304 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 BTBD17A6NE02 478 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 P2RY10O00398 339 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 KNG1P01042 644 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 SPARCP09486 303 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 ACSM4P0C7M7 580 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 EGR1P18146 543 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 FMO3P31513 532 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 CD80P33681 288 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 CD200P41217 278 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 ERFP50548 548 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 TSPAN31Q12999 210 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 CLEC12AQ5QGZ9 265 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 C16orf87Q6PH81 154 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 LNX2Q8N448 690 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 SCCPDHQ8NBX0 429 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 OR10S1Q8NGN2 331 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms