RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SIVA1O15304 175 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 ERI3O43414 337 aaKnown RBP2.55□□□□□ -2
PRKDC-205ENST00000535375 OTCP00480 354 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 FABP3P05413 133 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 PRKACAP17612 351 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 MSR1P21757 451 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 CDKN2BP42772 138 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 UBE2MP61081 183 aaKnown RBP2.55□□□□□ -2
PRKDC-205ENST00000535375 ARG2P78540 354 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 TCP10Q12799 353 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 PON2Q15165 354 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 QPRTQ15274 297 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 TRMT5Q32P41 509 aaKnown RBP2.55□□□□□ -2
PRKDC-205ENST00000535375 ANGPTL8Q6UXH0 198 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 MROH5Q6ZUA9 1318 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 MBOAT2Q6ZWT7 520 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 BHLHA15Q7RTS1 189 aaPredicted RBP2.55□□□□□ -2
PRKDC-205ENST00000535375 PROKR2Q8NFJ6 384 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 TMEM230Q96A57 120 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 EEF1AKMT3Q96AZ1 226 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 ZNF681Q96N22 645 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 FOXC2Q99958 501 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 BEX1Q9HBH7 125 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 PRSS16Q9NQE7 514 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 AGPAT4Q9NRZ5 378 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 RAD51BO15315 384 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 RP2O75695 350 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 SCELO95171 688 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 LSM8O95777 96 aaKnown RBP2.54□□□□□ -2
PRKDC-205ENST00000535375 CSNK1A1P48729 337 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 PTPN20Q4JDL3 420 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 THEM4Q5T1C6 240 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 GPR107Q5VW38 600 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 MRPL21Q7Z2W9 205 aaKnown RBP2.54□□□□□ -2
PRKDC-205ENST00000535375 LINC00523Q86TU6 105 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 CMTM8Q8IZV2 173 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 LGI3Q8N145 548 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 C11orf72Q8NBR9 251 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 OR10AD1Q8NGE0 317 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 OR52E2Q8NGJ4 325 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 ZNF75CPQ92670 426 aaPredicted RBP2.54□□□□□ -2
PRKDC-205ENST00000535375 ZNF382Q96SR6 550 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 MICU1Q9BPX6 476 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 SLC25A2Q9BXI2 301 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 OR2AG1Q9H205 316 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 SAV1Q9H4B6 383 aaPredicted RBP2.54□□□□□ -2
PRKDC-205ENST00000535375 CD209Q9NNX6 404 aa2.54□□□□□ -2
PRKDC-205ENST00000535375 YARS2Q9Y2Z4 477 aaKnown RBP2.54□□□□□ -2
PRKDC-205ENST00000535375 GPATCH8Q9UKJ3 1502 aaKnown RBP2.53□□□□□ -2
PRKDC-205ENST00000535375 KIF27Q86VH2 1401 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 ADGRA3Q8IWK6 1321 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 TMEM223A0PJW6 202 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 TMEM120BA0PK00 339 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 ZNF701M0R085 212 aaPredicted RBP2.53□□□□□ -2
PRKDC-205ENST00000535375 GGT1P19440 569 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 CSNK2A2P19784 350 aaPredicted RBP2.53□□□□□ -2
PRKDC-205ENST00000535375 U2AF2P26368 475 aaKnown RBP eCLIP2.53□□□□□ -2
PRKDC-205ENST00000535375 CEACAM6P40199 344 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 RFC3P40938 356 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 ZNF121P58317 390 aaPredicted RBP2.53□□□□□ -2
PRKDC-205ENST00000535375 IFT88Q13099 833 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 RGNQ15493 299 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 TPTE2P1Q5T6R2 138 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 DNAJC24Q6P3W2 148 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 ARL9Q6T311 187 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 LINC00336Q6ZUF6 198 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 WDR86Q86TI4 376 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 INO80EQ8NBZ0 244 aaPredicted RBP2.53□□□□□ -2
PRKDC-205ENST00000535375 OR51F2Q8NH61 342 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 RPEQ96AT9 228 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 CERS2Q96G23 380 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 CSPG4P5Q96PW8 444 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 DEFB129Q9H1M3 183 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 PIGUQ9H490 435 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 UBE2ZQ9H832 354 aaPredicted RBP2.53□□□□□ -2
PRKDC-205ENST00000535375 C12orf10Q9HB07 376 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 UVRAGQ9P2Y5 699 aa2.53□□□□□ -2
PRKDC-205ENST00000535375 NEURL4Q96JN8 1562 aa2.53□□□□□ -2.01
PRKDC-205ENST00000535375 FHOD3Q2V2M9 1422 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 BOLA2-SMG1P6H3BVE0 249 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 HPRT1P00492 218 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 HLA-DPB1P04440 258 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 IL4P05112 153 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 BCHEP06276 602 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 USF1P22415 310 aaPredicted RBP2.52□□□□□ -2.01
PRKDC-205ENST00000535375 WARSP23381 471 aaKnown RBP2.52□□□□□ -2.01
PRKDC-205ENST00000535375 CEACAM3P40198 252 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 FABP6P51161 128 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 DNAJC3Q13217 504 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 FAM78AQ5JUQ0 283 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 CEMP1Q6PRD7 247 aaPredicted RBP2.52□□□□□ -2.01
PRKDC-205ENST00000535375 WDR82Q6UXN9 313 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 CHST4Q8NCG5 386 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 ABHD3Q8WU67 409 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 APH1BQ8WW43 257 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 ESR2Q92731 530 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 L3HYPDHQ96EM0 354 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 NRBF2Q96F24 287 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 RNF145Q96MT1 663 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 DOK1Q99704 481 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms