RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 ST8SIA1Q92185 356 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 THRSPQ92748 146 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 RDH5Q92781 318 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 NTAN1Q96AB6 310 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 PSKH2Q96QS6 385 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 MBOAT4Q96T53 435 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 DHX35Q9H5Z1 703 aaKnown RBP4.14□□□□□ -1.75
CASP4-213ENST00000534356 SLC40A1Q9NP59 571 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 NT5MQ9NPB1 228 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 MMP26Q9NRE1 261 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 SAMSN1Q9NSI8 373 aaKnown RBP4.14□□□□□ -1.75
CASP4-213ENST00000534356 RMND1Q9NWS8 449 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 PSMD13Q9UNM6 376 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 SCN2AQ99250 2005 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 NUP210LQ5VU65 1888 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 CXorf51AA0A1B0GTR3 108 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 SIGLEC16A6NMB1 481 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 PDZK1P1A8MUH7 402 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 C21orf140B9A014 251 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 F8VZ95 297 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 ANGPT2O15123 496 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 KLF7O75840 302 aaPredicted RBP4.13□□□□□ -1.75
CASP4-213ENST00000534356 SMC2O95347 1197 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 RORAP35398 523 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 PTGDSP41222 190 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 PPT1P50897 306 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 KPNA2P52292 529 aaKnown RBP4.13□□□□□ -1.75
CASP4-213ENST00000534356 RPS15P62841 145 aaKnown RBP4.13□□□□□ -1.75
CASP4-213ENST00000534356 ARFRP1Q13795 201 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 KRTAP21-3Q3LHN1 58 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 Q6ZS92 163 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 IQCKQ8N0W5 287 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 NKAPP1Q8N9T2 125 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 SYT14Q8NB59 555 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 GPR26Q8NDV2 337 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 OR4D5Q8NGN0 318 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 MCEEQ96PE7 176 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 SNRNP25Q9BV90 132 aaKnown RBP4.13□□□□□ -1.75
CASP4-213ENST00000534356 PPIL1Q9Y3C6 166 aa4.13□□□□□ -1.75
CASP4-213ENST00000534356 FN1P02751 2386 aaKnown RBP4.13□□□□□ -1.75
CASP4-213ENST00000534356 ANK3Q12955 4377 aaKnown RBP4.13□□□□□ -1.75
CASP4-213ENST00000534356 MPDZO75970 2070 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 IGHV3OR16-13A0A075B7E8 117 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 A0A0J9YYE9 177 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 OR6C74A6NCV1 312 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 TRDCB7Z8K6 153 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 ZW10O43264 779 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 UGT1A9O60656 530 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 TRBC1P01850 177 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 UCHL3P15374 230 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 RPA2P15927 270 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 ZNF7P17097 686 aaPredicted RBP4.12□□□□□ -1.75
CASP4-213ENST00000534356 ATP6V1B2P21281 511 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 TEAD1P28347 426 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 MIPP30301 263 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 HTR1FP30939 366 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 CAPZBP47756 277 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 SPINT3P49223 89 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 PRPS1P60891 318 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 AP1S1P61966 158 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 CBX1P83916 185 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 TGFBR3Q03167 851 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 HENMT1Q5T8I9 393 aaKnown RBP4.12□□□□□ -1.75
CASP4-213ENST00000534356 MLIPQ5VWP3 458 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 TTC23Q5W5X9 447 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 SLC25A24Q6NUK1 477 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 RNF165Q6ZSG1 346 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 SHISA6Q6ZSJ9 500 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 OR2L13Q8N349 312 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 ZNF433Q8N7K0 673 aaPredicted RBP4.12□□□□□ -1.75
CASP4-213ENST00000534356 ST6GALNAC3Q8NDV1 305 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 ZNF514Q96K75 400 aaPredicted RBP4.12□□□□□ -1.75
CASP4-213ENST00000534356 CNDP1Q96KN2 507 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 SMR3AQ99954 134 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 ILKAPQ9H0C8 392 aaPredicted RBP4.12□□□□□ -1.75
CASP4-213ENST00000534356 UGT1A7Q9HAW7 530 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 UGT1A10Q9HAW8 530 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 UGT1A8Q9HAW9 530 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 FAM60AQ9NP50 221 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 RAB18Q9NP72 206 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
CASP4-213ENST00000534356 RNF14Q9UBS8 474 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 PRO0461Q9UI25 63 aa4.12□□□□□ -1.75
CASP4-213ENST00000534356 FLNAP21333 2647 aaKnown RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 VPS13CQ709C8 3753 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 CSPG4Q6UVK1 2322 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 PCM1Q15154 2024 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 C1orf232A0A0U1RR37 186 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 PSMD11O00231 422 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 DCTN6O00399 190 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 SLC25A14O95258 325 aaPredicted RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 LSM8O95777 96 aaKnown RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 IGHG4P01861 327 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 HLA-DQB2P05538 268 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 PSG2P11465 335 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 HNF1AP20823 631 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 PBLDP30039 288 aaPredicted RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 TDGF1P3P51864 188 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 ZNF235Q14590 738 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 MPPED2Q15777 294 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms