RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 GYG2O15488 501 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ANGPTL7O43827 346 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SNX3O60493 162 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SERPINI2O75830 405 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 KRT36O76013 467 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 HSPA4LO95757 839 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 OPN1SWP03999 348 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ENO1P06733 434 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 RBP1P09455 135 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 TFPTP0C1Z6 253 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM90A15PP0C7V4 464 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM90A14PP0C7W9 464 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 DUX4L2P0CJ85 424 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 DUX4L3P0CJ86 424 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 DUX4L5P0CJ88 424 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 DUX4L6P0CJ89 424 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 DUX4L7P0CJ90 424 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 PNMTP11086 282 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 RPS2P15880 293 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF43P17038 809 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SDC1P18827 310 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 BGNP21810 368 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 UQCRC2P22695 453 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 CXCR1P25024 350 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 GTF2E2P29084 291 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 TGFBR2P37173 567 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FRKP42685 505 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 RANBP1P43487 201 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 RPS5P46782 204 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 PCP4P48539 62 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SH3BGRP55822 239 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 RPS23P62266 143 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 TXNL4AP83876 142 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 CAV1Q03135 178 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 EMX1Q04741 257 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 EGR4Q05215 589 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC3A1Q07837 685 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FUT5Q11128 374 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FHL3Q13643 280 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 KPNB1Q14974 876 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 TMEM155Q4W5P6 130 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 RFTN2Q52LD8 501 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 CFAP157Q5JU67 520 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF678Q5SXM1 525 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 C1orf140Q5VVS0 124 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 WDR25Q64LD2 544 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM90A2PQ658T7 463 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 LIN54Q6MZP7 749 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 METTL2BQ6P1Q9 378 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 TNFAIP8L2Q6P589 184 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 KLC3Q6P597 504 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ZCCHC12Q6PEW1 402 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 DUX4L9Q6RFH8 374 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FRRS1Q6ZNA5 592 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 GDPGP1Q6ZNW5 385 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 C18orf65Q6ZTR6 163 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 C6orf120Q7Z4R8 191 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 CALHM3Q86XJ0 350 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ARHGAP24Q8N264 748 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 C10orf111Q8N326 155 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SPICQ8N5J4 248 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF283Q8N7M2 679 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ANKFN1Q8N957 763 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SCAIQ8N9R8 606 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SCCPDHQ8NBX0 429 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM71CQ8NEG0 241 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SDR9C7Q8NEX9 313 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 OR2Z1Q8NG97 314 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 OR4F17Q8NGA8 305 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 AKR7LQ8NHP1 331 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 KLF14Q8TD94 323 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 C10orf82Q8WW14 230 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 DNAJC9Q8WXX5 260 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 CDKL2Q92772 493 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 TAAR8Q969N4 342 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 MAELQ96JY0 434 aaKnown RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 WDFY2Q96P53 400 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF317Q96PQ6 595 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 OR4F4Q96R69 305 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 TAPBPLQ9BX59 468 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ROPN1BQ9BZX4 212 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 EGLN1Q9GZT9 426 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 VCXQ9H320 206 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 OR51I1Q9H343 314 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 RNF121Q9H920 327 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ROPN1Q9HAT0 212 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 CDH20Q9HBT6 801 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 PALMDQ9NP74 551 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ZDHHC18Q9NUE0 388 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ASIC5Q9NY37 505 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 PSMC3IPQ9P2W1 217 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 DUX4Q9UBX2 424 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 MARCOQ9UEW3 520 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 IL20RAQ9UHF4 553 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC7A8Q9UHI5 535 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 VPREB3Q9UKI3 123 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 PCDHGB4Q9UN71 923 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAF1Q9UNN5 650 aaPredicted RBP2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM96BQ9Y3D0 163 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 CCL27Q9Y4X3 112 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms