RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 MAVSQ7Z434 540 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 NDUFA11Q86Y39 141 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 Q8N7P7 452 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 C11orf65Q8NCR3 313 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 PAPD5Q8NDF8 572 aaKnown RBP6.37□□□□□ -1.39
NXF1-215ENST00000533440 BEND2Q8NDZ0 799 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 OR4C13Q8NGP0 309 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 WIPF2Q8TF74 440 aaPredicted RBP6.37□□□□□ -1.39
NXF1-215ENST00000533440 TMEM239Q8WW34 195 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 TNFRSF14Q92956 283 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 ZNF583Q96ND8 569 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 B9D2Q9BPU9 175 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 CPPED1Q9BRF8 314 aaPredicted RBP6.37□□□□□ -1.39
NXF1-215ENST00000533440 TMEM109Q9BVC6 243 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 SIRT7Q9NRC8 400 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 MEIOCA2RUB1 952 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 EVPLLA8MZ36 301 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 H3BUX3 64 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 POLR3GO15318 223 aaPredicted RBP6.36□□□□□ -1.39
NXF1-215ENST00000533440 FBXO24O75426 580 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 OR5F1O95221 314 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 PAHP00439 452 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 GYPAP02724 150 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 VSIG10L2P0DP72 767 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 KITP10721 976 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 CD28P10747 220 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 SAA4P35542 130 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 LSM6P62312 80 aaKnown RBP6.36□□□□□ -1.39
NXF1-215ENST00000533440 PRB3Q04118 309 aaPredicted RBP6.36□□□□□ -1.39
NXF1-215ENST00000533440 CD69Q07108 199 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 ACSM1Q08AH1 577 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 FHL1Q13642 323 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 OR8B8Q15620 311 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 RSPO1Q2MKA7 263 aaPredicted RBP6.36□□□□□ -1.39
NXF1-215ENST00000533440 BEND6Q5SZJ8 279 aaPredicted RBP6.36□□□□□ -1.39
NXF1-215ENST00000533440 TEX36Q5VZQ5 186 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 FAM90A1Q86YD7 464 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 FGFRL1Q8N441 504 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 GCSAMQ8N6F7 178 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 DTX3Q8N9I9 347 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 PLPP7Q8NBV4 271 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 ST8SIA4Q92187 359 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 TAMM41Q96BW9 452 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 SPDL1Q96EA4 605 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 HCAR1Q9BXC0 346 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 POLR2J2Q9GZM3 115 aaKnown RBP6.36□□□□□ -1.39
NXF1-215ENST00000533440 POLR2J3Q9H1A7 115 aaKnown RBP6.36□□□□□ -1.39
NXF1-215ENST00000533440 WDR76Q9H967 626 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 FN3KRPQ9HA64 309 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 RAB18Q9NP72 206 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 THAP1Q9NVV9 213 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 ONECUT1Q9UBC0 465 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 RIMS3Q9UJD0 308 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 MED31Q9Y3C7 131 aa6.36□□□□□ -1.39
NXF1-215ENST00000533440 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 TEX13CA0A0J9YWL9 993 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 A0A1B0GW55 424 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 A0A1W2PRD5 423 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 A0A1W2PRF3 423 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 A0A1W2PRM7 423 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 HTR3EA5X5Y0 456 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 H7C1C5 153 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 RER1O15258 196 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 AHCYL1O43865 530 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 LHBP01229 141 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 DUX4L2P0CJ85 424 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 DUX4L3P0CJ86 424 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 DUX4L4P0CJ87 422 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 DUX4L5P0CJ88 424 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 DUX4L6P0CJ89 424 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 DUX4L7P0CJ90 424 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 CTLA4P16410 223 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 CD33P20138 364 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 MSX2P35548 267 aaPredicted RBP6.35□□□□□ -1.39
NXF1-215ENST00000533440 UBE2E1P51965 193 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 CRYBA2P53672 197 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 DLX1P56177 255 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 TAS2R41P59536 307 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 LCN6P62502 163 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 HIST1H3AP68431 136 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 KLRD1Q13241 179 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 GK2Q14410 553 aaPredicted RBP6.35□□□□□ -1.39
NXF1-215ENST00000533440 LY6EQ16553 131 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 AANATQ16613 207 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 KRTAP27-1Q3LI81 207 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 ZBTB37Q5TC79 503 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 HIST2H3PS2Q5TEC6 136 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 OTPQ5XKR4 325 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 PGBD2Q6P3X8 592 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 DUX4L9Q6RFH8 374 aaPredicted RBP6.35□□□□□ -1.39
NXF1-215ENST00000533440 DLEU7Q6UYE1 221 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 HIST2H3AQ71DI3 136 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 PATL1Q86TB9 770 aaKnown RBP6.35□□□□□ -1.39
NXF1-215ENST00000533440 CMTM4Q8IZR5 234 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 Q8N2B8 174 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 PNKDQ8N490 385 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 BOLLQ8N9W6 283 aaKnown RBP6.35□□□□□ -1.39
NXF1-215ENST00000533440 C8orf46Q8TAG6 207 aa6.35□□□□□ -1.39
NXF1-215ENST00000533440 SLC7A13Q8TCU3 470 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms