RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CENPMQ9NSP4 180 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 NIPBLQ6KC79 2804 aaeCLIP17.38■□□□□ 0.37
CCS-208ENST00000533244 C2CD3Q4AC94 2353 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 HIVEP2P31629 2446 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 M0R129 80 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 LCATP04180 440 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 GRB2P62993 217 aaKnown RBP17.38■□□□□ 0.37
CCS-208ENST00000533244 GGTLC2Q14390 218 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 GK2Q14410 553 aaPredicted RBP17.38■□□□□ 0.37
CCS-208ENST00000533244 TSTQ16762 297 aaKnown RBP17.38■□□□□ 0.37
CCS-208ENST00000533244 AADACL4Q5VUY2 407 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 Q71RC1 249 aaPredicted RBP17.38■□□□□ 0.37
CCS-208ENST00000533244 ZNF454Q8N9F8 522 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 TMEM163Q8TC26 289 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 TEAD3Q99594 435 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 TOR3AQ9H497 397 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 SAP30LQ9HAJ7 183 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 ZNF275Q9NSD4 429 aaPredicted RBP17.38■□□□□ 0.37
CCS-208ENST00000533244 IQCF6A8MYZ5 107 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 CD5LO43866 347 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 LILRA1O75019 489 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 OPRL1P41146 370 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 SLC15A1P46059 708 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 RPS7P62081 194 aaKnown RBP17.37■□□□□ 0.37
CCS-208ENST00000533244 SNAI3Q3KNW1 292 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 OR2T2Q6IF00 324 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 TCEANCQ8N8B7 351 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 DECR2Q9NUI1 292 aa17.37■□□□□ 0.37
CCS-208ENST00000533244 IGHV1-69-2A0A0G2JMI3 117 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 A0A1B0GWJ7 208 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 C5orf63A6NC05 138 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 E9PQ18 207 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 EI24O14681 340 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 TLX2O43763 284 aaPredicted RBP17.36■□□□□ 0.37
CCS-208ENST00000533244 LYNP07948 512 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 NAA10P41227 235 aaPredicted RBP17.36■□□□□ 0.37
CCS-208ENST00000533244 SLC6A9P48067 706 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 PRKXP51817 358 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 TMEM33P57088 247 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 MALLQ13021 153 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 LCN1P1Q5VSP4 162 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 NXNL2Q5VZ03 156 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 USP51Q70EK9 711 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 SLC16A9Q7RTY1 509 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 OR8G5Q8NG78 346 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 RIBC2Q9H4K1 309 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 KLHDC2Q9Y2U9 406 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 TANC2Q9HCD6 1990 aa17.36■□□□□ 0.37
CCS-208ENST00000533244 IGHV4-31P0DP07 118 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 SELEP16581 610 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 ALOX5APP20292 161 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 ALDH3A2P51648 485 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 RIPPLY3P57055 190 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 TAF13Q15543 124 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 SPRNQ5BIV9 151 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 SPATC1Q76KD6 591 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 MEPCEQ7L2J0 689 aaKnown RBP17.35■□□□□ 0.37
CCS-208ENST00000533244 PRSS45Q7RTY3 260 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 BCDIN3DQ7Z5W3 292 aaKnown RBP17.35■□□□□ 0.37
CCS-208ENST00000533244 PQLC1Q8N2U9 271 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 ELMOD3Q96FG2 381 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 YIPF3Q9GZM5 350 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 EGLN1Q9GZT9 426 aa17.35■□□□□ 0.37
CCS-208ENST00000533244 ANK3Q12955 4377 aaKnown RBP17.35■□□□□ 0.37
CCS-208ENST00000533244 GPR6P46095 362 aaPredicted RBP17.34■□□□□ 0.37
CCS-208ENST00000533244 TRIP10Q15642 601 aa17.34■□□□□ 0.37
CCS-208ENST00000533244 OR5AS1Q8N127 324 aa17.34■□□□□ 0.37
CCS-208ENST00000533244 CBR4Q8N4T8 237 aa17.34■□□□□ 0.37
CCS-208ENST00000533244 ZNF283Q8N7M2 679 aa17.34■□□□□ 0.37
CCS-208ENST00000533244 ZNF582Q96NG8 517 aaPredicted RBP17.34■□□□□ 0.37
CCS-208ENST00000533244 SLC30A2Q9BRI3 323 aa17.34■□□□□ 0.37
CCS-208ENST00000533244 REPIN1Q9BWE0 567 aaKnown RBP17.34■□□□□ 0.37
CCS-208ENST00000533244 ABCA2Q9BZC7 2435 aa17.34■□□□□ 0.37
CCS-208ENST00000533244 CACNG2Q9Y698 323 aa17.34■□□□□ 0.37
CCS-208ENST00000533244 SLC22A31A6NKX4 558 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 TPD52L2O43399 206 aaKnown RBP17.33■□□□□ 0.36
CCS-208ENST00000533244 CDC14BO60729 498 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 APOC1P02654 83 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 SLC2A1P11166 492 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 HSD11B1P28845 292 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 CX3CR1P49238 355 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 TNFAIP6P98066 277 aaPredicted RBP17.33■□□□□ 0.36
CCS-208ENST00000533244 ZNF92Q03936 586 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 GLYATL3Q5SZD4 288 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 PGAP1Q75T13 922 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 OR2Z1Q8NG97 314 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 OR2AE1Q8NHA4 323 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 SPSB4Q96A44 273 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 IL4I1Q96RQ9 567 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 HAO2Q9NYQ3 351 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 IL19Q9UHD0 177 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 SONP18583 2426 aaKnown RBP17.33■□□□□ 0.36
CCS-208ENST00000533244 NAV3Q8IVL0 2385 aa17.33■□□□□ 0.36
CCS-208ENST00000533244 H2BFMP0C1H6 154 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 TNFSF4P23510 183 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 GZMKP49863 264 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 CHN2P52757 468 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 RAD23AP54725 363 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 PRSS12P56730 875 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 MRPL21Q7Z2W9 205 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms