RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 DSCR4P56555 118 aaPredicted RBP13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 BTN1A1Q13410 526 aa13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 IL11RAQ14626 422 aa13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 C16orf47Q6ZP98 133 aaPredicted RBP13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 ATG4DQ86TL0 474 aaPredicted RBP13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 OR5B12Q96R08 314 aa13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 GSTP1P09211 210 aaKnown RBP13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 SLC38A9Q8NBW4 561 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 SAV1Q9H4B6 383 aaPredicted RBP13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 RPS10P5Q9NQ39 176 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 MRPS18AQ9NVS2 196 aaKnown RBP13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 ICAM5Q9UMF0 924 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 KLF13Q9Y2Y9 288 aaPredicted RBP13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 ZNF236Q9UL36 1845 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 OR6C65A6NJZ3 312 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 SSX4O60224 188 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 NXPH2O95156 264 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 GPANK1O95872 356 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 GNB3P16520 340 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 CDAP32320 146 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 GALNSP34059 522 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 TMEM200AQ86VY9 491 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 OR10R2Q8NGX6 335 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 MENTQ9BUN1 341 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 SPTBP11277 2137 aa13.77□□□□□ -0.21
PCDHA3-202ENST00000532566 IGHV4-34P06331 123 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 CTLA4P16410 223 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 MAGEB1P43366 347 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 GUCA2AQ02747 115 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 CATR1Q13166 79 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 ZNF680Q8NEM1 530 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 OR51F2Q8NH61 342 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 C10orf90Q96M02 699 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 ABHD1Q96SE0 405 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 SPACA1Q9HBV2 294 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 GHRLQ9UBU3 117 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 TRIOBPQ9H2D6 2365 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 A0A1B0GTH9 108 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 RNF212BA8MTL3 300 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 SDCBPO00560 298 aaPredicted RBP13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 OR2F2O95006 317 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 OMGP23515 440 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 FCARP24071 287 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 HRH1P35367 487 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 TRA2AQ13595 282 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 OR2F1Q13607 317 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 PRSS53Q2L4Q9 553 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 EXD3Q8N9H8 876 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 NPEPL1Q8NDH3 523 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 OR6K3Q8NGY3 331 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 FBLIM1Q8WUP2 373 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 SLAMF9Q96A28 289 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 SEH1LQ96EE3 360 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 MARVELD1Q9BSK0 173 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 BARHL1Q9BZE3 327 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 OR5V1Q9UGF6 321 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 KIF25Q9UIL4 384 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 FBXO7Q9Y3I1 522 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 ANK1P16157 1881 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 WDR90Q96KV7 1748 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 KIR2DS1A0A191URI9 304 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 TEX51A0A1B0GUA7 166 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 TNFSF11O14788 317 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 OGG1O15527 345 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 CT45A8P0DMV1 189 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 CT45A9P0DMV2 189 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 PTHLHP12272 177 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 KIR2DS4P43632 304 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 RAG2P55895 527 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 SLC37A1P57057 533 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 TFF2Q03403 129 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 KIR2DS1Q14954 304 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 TAF9Q16594 264 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 CT45A2Q5DJT8 189 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 ELFN2Q5R3F8 820 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 LAIR1Q6GTX8 287 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 FAM199XQ6PEV8 388 aaPredicted RBP13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 SFTPA2Q8IWL1 248 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 ARHGEF39Q8N4T4 335 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 TEX19Q8NA77 164 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 NKX3-1Q99801 234 aaPredicted RBP13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 SLC17A5Q9NRA2 495 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 V9GYH0 126 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 CENPVL1A0A0U1RR11 272 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 OR5H14A6NHG9 310 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 TIMM8AO60220 97 aaPredicted RBP13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 ACTL6BO94805 426 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 NRASP01111 189 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 CLDN15P56746 228 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 CLN3Q13286 438 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 KIRREL1Q96J84 757 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 RNF32Q9H0A6 362 aa13.76□□□□□ -0.21
PCDHA3-202ENST00000532566 FOXS1O43638 330 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 NME2P22392 152 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 SCAND1P57086 179 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 ISXQ2M1V0 245 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 TM4SF19Q96DZ7 209 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 TP53TG5Q9Y2B4 290 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 TOX3O15405 576 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms