RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 RBMY1EA6NEQ0 496 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 M0R036 132 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 CDIPTO14735 213 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 HPGDSO60760 199 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 RAB36O95755 333 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 PTHP01270 115 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 OR8U8P0C7N1 319 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 RBMY1DP0C7P1 496 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 RBMY1A1P0DJD3 496 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 PLA2G2AP14555 144 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 PGAM2P15259 253 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 WARSP23381 471 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 PPICP45877 212 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 RPS9P46781 194 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 STC1P52823 247 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 VSX2P58304 361 aaPredicted RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 NANOS2P60321 138 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 RHOAP61586 193 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 RPL10AP62906 217 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 MGAT3Q09327 533 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 FCHO2Q0JRZ9 810 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 ELAVL2Q12926 359 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 CAPRIN1Q14444 709 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 TGIF1Q15583 401 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 TOMM34Q15785 309 aaPredicted RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 TTLL9Q3SXZ7 439 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 ZFP69Q49AA0 526 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF658Q5TYW1 1059 aaPredicted RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 HBMQ6B0K9 141 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 FAM45BPQ6NSW5 357 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 DRAM2Q6UX65 266 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF620Q6ZNG0 422 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 HIPK1Q86Z02 1210 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 FAM71AQ8IYT1 594 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 LRRC34Q8IZ02 419 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 PGAM4Q8N0Y7 254 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 SPICQ8N5J4 248 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 TMEM251Q8N6I4 163 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 OR2L5Q8NG80 312 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 FAM45AQ8TCE6 357 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 RNASEH2CQ8TDP1 164 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF501Q96CX3 271 aaPredicted RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 OTUB2Q96DC9 234 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 SGTBQ96EQ0 304 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 GALNT14Q96FL9 552 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 ADTRPQ96IZ2 230 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 SMIM14Q96QK8 99 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 C9orf16Q9BUW7 83 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 DEFB127Q9H1M4 99 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 OR51V1Q9H2C8 321 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 OR51B5Q9H339 312 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 SRMSQ9H3Y6 488 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 RPF2Q9H7B2 306 aaKnown RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 PANK3Q9H999 370 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 KCNJ16Q9NPI9 418 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 SCRT2Q9NQ03 307 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 NLE1Q9NVX2 485 aaPredicted RBP3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 CLCF1Q9UBD9 225 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 PCSK5Q92824 1860 aa3.34□□□□□ -1.87
AC055878.1-201ENST00000531858 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 IGKV1D-13A0A0B4J2D9 117 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 SLC5A10A0PJK1 596 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 C9J4A7 227 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 LRRN3E7EW58 273 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 H3BNH8 94 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 SAP18O00422 153 aaKnown RBP3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 GABRPO00591 440 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 UBDO15205 165 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 CTNSO60931 367 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 UGT2B11O75310 529 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 OR5F1O95221 314 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 RAB3DO95716 219 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 SNAP29O95721 258 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 IGHV3-48P01763 117 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 IGKV2-30P06310 120 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 RETP07949 1114 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 CTXN2P0C2S0 81 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 GKN3PP0CG01 181 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 PGA5P0DJD9 388 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 C8orf88P0DMB2 117 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 IGKV1-13P0DP09 117 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 HSPD1P10809 573 aaKnown RBP3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 LIPCP11150 499 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 GGT1P19440 569 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 RAB3BP20337 219 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 HTR1DP28221 377 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 FMO3P31513 532 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 EVI2BP34910 448 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 VDAC2P45880 294 aaPredicted RBP3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 UBE2E1P51965 193 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 RAP1GDS1P52306 607 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 OR12D2P58182 307 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 TAS2R19P59542 299 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 PPP1CBP62140 327 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 PRKCDQ05655 676 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 AQP6Q13520 282 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 RAB31Q13636 194 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 PRPSAP1Q14558 356 aa3.33□□□□□ -1.88
AC055878.1-201ENST00000531858 DNAL1Q4LDG9 190 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms