RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 COX10Q12887 443 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 TRAP1Q12931 704 aaKnown RBP13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 OR8G1Q15617 311 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 KCNMB1Q16558 191 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 WDR25Q64LD2 544 aaPredicted RBP13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 BRICD5Q6PL45 260 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 FIP1L1Q6UN15 594 aaKnown RBP13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 LYPD2Q6UXB3 125 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 PGAP1Q75T13 922 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 FITM2Q8N6M3 262 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 OR4F5Q8NH21 305 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 NMNAT3Q96T66 252 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 ADAT1Q9BUB4 502 aaKnown RBP13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 IFT27Q9BW83 186 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 FN3KQ9H479 309 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 BEX1Q9HBH7 125 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 SRA1Q9HD15 236 aaKnown RBP13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 TMCC3Q9ULS5 477 aa13.19□□□□□ -0.3
CHMP4A-204ENST00000530996 IGLV1-36A0A0B4J1U3 117 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 KIR2DS1A0A191URI9 304 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 SRRM5B3KS81 715 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 C22orf46C9J442 243 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 DCTN6O00399 190 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 NDUFAB1O14561 156 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 PTP4A3O75365 173 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 GMNNO75496 209 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 ACSM4P0C7M7 580 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 RHCEP18577 417 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 SLC6A6P31641 620 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 MDH1P40925 334 aaKnown RBP13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 PMELP40967 661 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 FXYD6P3P58550 94 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 SPIBQ01892 262 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 DBPQ10586 325 aaPredicted RBP13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 GK2Q14410 553 aaPredicted RBP13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 SEC23BQ15437 767 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 OR8B8Q15620 311 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 SLC36A3Q495N2 470 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 SLC26A10Q8NG04 563 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 OR4K13Q8NH42 304 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 WFDC12Q8WWY7 111 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 SLCO4A1Q96BD0 722 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 CCT8L2Q96SF2 557 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 HOPXQ9BPY8 73 aaPredicted RBP13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 FN3KRPQ9HA64 309 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 NDUFAF4Q9P032 175 aa13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
CHMP4A-204ENST00000530996 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 TXNDC12O95881 172 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 CA6P23280 308 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 GGT2P36268 569 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 GATA4P43694 442 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 HIST1H3AP68431 136 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 ECH1Q13011 328 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 HIST2H3PS2Q5TEC6 136 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 SFRP4Q6FHJ7 346 aaPredicted RBP13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 SLC18B1Q6NT16 456 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 HIST2H3AQ71DI3 136 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 LNX2Q8N448 690 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 KIR3DL3Q8N743 410 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 CELF2-AS1Q8N7Q2 184 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 SDR9C7Q8NEX9 313 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 ERGIC1Q969X5 290 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 DACT3Q96B18 629 aaPredicted RBP13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 CHIAQ9BZP6 476 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 OR52D1Q9H346 318 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 ERVK-18Q9QC07 812 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 B9D1Q9UPM9 204 aa13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 SAMD4AQ9UPU9 718 aaKnown RBP13.17□□□□□ -0.3
CHMP4A-204ENST00000530996 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 hCG_1807616A0A1W2PRN6 198 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 GGT3PA6NGU5 568 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 A6NLC8 198 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 M0R135 149 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 ADAM20O43506 726 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 SASH3O75995 380 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 TOX4O94842 621 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 SFTPBP07988 381 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 HIST1H1CP16403 213 aaKnown RBP13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 CFHR2P36980 270 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 CD200P41217 278 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 NPY4RP50391 375 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 TPTEP56180 551 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 HOXA4Q00056 320 aaPredicted RBP13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 SRSF4Q08170 494 aaKnown RBP13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 MAB21L1Q13394 359 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 MPPED2Q15777 294 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 CLEC12AQ5QGZ9 265 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 ZNF362Q5T0B9 420 aaPredicted RBP13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 CD276Q5ZPR3 534 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 COLCA1Q6ZS62 124 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 TSEN54Q7Z6J9 526 aaKnown RBP13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 OR6V1Q8N148 313 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 SCCPDHQ8NBX0 429 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 Q8TCH9 128 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 GATAD2BQ8WXI9 593 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 SPTSSAQ969W0 71 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms