RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CACNG6Q9BXT2 260 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 MS4A5Q9H3V2 200 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 FZR1Q9UM11 496 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 KLHDC2Q9Y2U9 406 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 STARD10Q9Y365 291 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 RPL36Q9Y3U8 105 aaKnown RBP13.12□□□□□ -0.31
CCS-206ENST00000530961 COL6A5A8TX70 2615 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 JMJD1CQ15652 2540 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 A0A1W2PPW3 197 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 M0R233 179 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 CLIC3O95833 236 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 RAC2P15153 192 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 LIPAP38571 399 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 PPOXP50336 477 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 PRKXP51817 358 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 ART1P52961 327 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 CXCR4P61073 352 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 ISL1P61371 349 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 MALLQ13021 153 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 SPATA46Q5T0L3 261 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 ZNF322Q6U7Q0 402 aaPredicted RBP13.11□□□□□ -0.31
CCS-206ENST00000530961 NAA40Q86UY6 237 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 LRP11Q86VZ4 500 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 ZNF679Q8IYX0 411 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 C8orf59Q8N0T1 100 aaPredicted RBP13.11□□□□□ -0.31
CCS-206ENST00000530961 ZNF283Q8N7M2 679 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 HAVCR1Q96D42 359 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 OR8B4Q96RC9 309 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 AASSQ9UDR5 926 aa13.11□□□□□ -0.31
CCS-206ENST00000530961 ABCA4P78363 2273 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 WBP4O75554 376 aaKnown RBP13.1□□□□□ -0.31
CCS-206ENST00000530961 CLPTM1O96005 669 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 MT-ND5P03915 603 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 ERCC1P07992 297 aaPredicted RBP13.1□□□□□ -0.31
CCS-206ENST00000530961 CDKN1AP38936 164 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 HSPA13P48723 471 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 PTH2RP49190 550 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 CX3CR1P49238 355 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 AQP4P55087 323 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 ATP5J2P56134 94 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 ACTC1P68032 377 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 ACTA1P68133 377 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 NKPD1Q17RQ9 610 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 LRRN1Q6UXK5 716 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 FBXW12Q6X9E4 464 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 USP51Q70EK9 711 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 OR10H4Q8NGA5 316 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 OR52H1Q8NGJ2 320 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 APH1BQ8WW43 257 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 CMBLQ96DG6 245 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
CCS-206ENST00000530961 RAB1BQ9H0U4 201 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 CXXC4Q9H2H0 198 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 BARX1Q9HBU1 254 aaPredicted RBP13.1□□□□□ -0.31
CCS-206ENST00000530961 DYNLRB1Q9NP97 96 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 CYSLTR2Q9NS75 346 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
CCS-206ENST00000530961 TAAR3PQ9P1P4 343 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 CGGBP1Q9UFW8 167 aaPredicted RBP13.1□□□□□ -0.31
CCS-206ENST00000530961 COPS3Q9UNS2 423 aa13.1□□□□□ -0.31
CCS-206ENST00000530961 EXOGQ9Y2C4 368 aaKnown RBP13.1□□□□□ -0.31
CCS-206ENST00000530961 A0A1W2PQL4 384 aaPredicted RBP13.09□□□□□ -0.31
CCS-206ENST00000530961 ACOD1A6NK06 481 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 J3QRE1 110 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 FADS2O95864 444 aaKnown RBP13.09□□□□□ -0.31
CCS-206ENST00000530961 DBTP11182 482 aaKnown RBP13.09□□□□□ -0.31
CCS-206ENST00000530961 SELEP16581 610 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 KITLGP21583 273 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 MPV17P39210 176 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 RIDAP52758 137 aaKnown RBP13.09□□□□□ -0.31
CCS-206ENST00000530961 ZNF121P58317 390 aaPredicted RBP13.09□□□□□ -0.31
CCS-206ENST00000530961 ZNF91Q05481 1191 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 RAB40BQ12829 278 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 PSG7Q13046 419 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 PRSS57Q6UWY2 283 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 THAP5Q7Z6K1 395 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 ACBD7Q8N6N7 88 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 SNX33Q8WV41 574 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 OPA3Q9H6K4 179 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 IKZF2Q9UKS7 526 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 LRP12Q9Y561 859 aa13.09□□□□□ -0.31
CCS-206ENST00000530961 ACANP16112 2415 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 PLSCR5A0PG75 271 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 IRGMA1A4Y4 181 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 XRCC2O43543 280 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 SULT1C4O75897 302 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 APOL3O95236 402 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 KRT8P05787 483 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 ANXA2P07355 339 aaKnown RBP13.08□□□□□ -0.32
CCS-206ENST00000530961 ADRA2AP08913 450 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 GNAO1P09471 354 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 CFL1P23528 166 aaKnown RBP13.08□□□□□ -0.32
CCS-206ENST00000530961 VHLP40337 213 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 ALDH3B1P43353 468 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 EFNA4P52798 201 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 PSMA6P60900 246 aaKnown RBP13.08□□□□□ -0.32
CCS-206ENST00000530961 SNAI3Q3KNW1 292 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 ZMAT1Q5H9K5 638 aa13.08□□□□□ -0.32
CCS-206ENST00000530961 SHEQ5VZ18 495 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms