RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CLEC6AQ6EIG7 209 aa2.57□□□□□ -2
CTR9-204ENST00000529355 FAM71E1Q6IPT2 247 aa2.57□□□□□ -2
CTR9-204ENST00000529355 TTC33Q6PID6 262 aaPredicted RBP2.57□□□□□ -2
CTR9-204ENST00000529355 FAM92BQ6ZTR7 304 aa2.57□□□□□ -2
CTR9-204ENST00000529355 EFL1Q7Z2Z2 1120 aaKnown RBP2.57□□□□□ -2
CTR9-204ENST00000529355 DCXRQ7Z4W1 244 aa2.57□□□□□ -2
CTR9-204ENST00000529355 H1FOOQ8IZA3 346 aaPredicted RBP2.57□□□□□ -2
CTR9-204ENST00000529355 MREGQ8N565 214 aa2.57□□□□□ -2
CTR9-204ENST00000529355 CSGALNACT2Q8N6G5 542 aa2.57□□□□□ -2
CTR9-204ENST00000529355 UBL4BQ8N7F7 174 aa2.57□□□□□ -2
CTR9-204ENST00000529355 BHLHE23Q8NDY6 225 aa2.57□□□□□ -2
CTR9-204ENST00000529355 OR4F6Q8NGB9 312 aa2.57□□□□□ -2
CTR9-204ENST00000529355 OR6Q1Q8NGQ2 317 aa2.57□□□□□ -2
CTR9-204ENST00000529355 OR13C2Q8NGS9 318 aa2.57□□□□□ -2
CTR9-204ENST00000529355 TNFRSF14Q92956 283 aa2.57□□□□□ -2
CTR9-204ENST00000529355 RBMXL1Q96E39 390 aaKnown RBP2.57□□□□□ -2
CTR9-204ENST00000529355 NEURL3Q96EH8 262 aa2.57□□□□□ -2
CTR9-204ENST00000529355 TSSK3Q96PN8 268 aa2.57□□□□□ -2
CTR9-204ENST00000529355 ECSITQ9BQ95 431 aa2.57□□□□□ -2
CTR9-204ENST00000529355 BPIFA3Q9BQP9 254 aa2.57□□□□□ -2
CTR9-204ENST00000529355 FRMD8P1Q9BZ68 369 aaPredicted RBP2.57□□□□□ -2
CTR9-204ENST00000529355 RPF2Q9H7B2 306 aaKnown RBP2.57□□□□□ -2
CTR9-204ENST00000529355 CD209Q9NNX6 404 aa2.57□□□□□ -2
CTR9-204ENST00000529355 HYPKQ9NX55 129 aa2.57□□□□□ -2
CTR9-204ENST00000529355 PSMC3IPQ9P2W1 217 aaPredicted RBP2.57□□□□□ -2
CTR9-204ENST00000529355 CD84Q9UIB8 345 aa2.57□□□□□ -2
CTR9-204ENST00000529355 DNAJC12Q9UKB3 198 aa2.57□□□□□ -2
CTR9-204ENST00000529355 PSG8Q9UQ74 426 aa2.57□□□□□ -2
CTR9-204ENST00000529355 USH1CQ9Y6N9 552 aa2.57□□□□□ -2
CTR9-204ENST00000529355 RTL1A6NKG5 1358 aa2.57□□□□□ -2
CTR9-204ENST00000529355 ADCY9O60503 1353 aa2.57□□□□□ -2
CTR9-204ENST00000529355 NUP160Q12769 1436 aa2.57□□□□□ -2
CTR9-204ENST00000529355 SETD5Q9C0A6 1442 aa2.57□□□□□ -2
CTR9-204ENST00000529355 RIMS2Q9UQ26 1411 aa2.57□□□□□ -2
CTR9-204ENST00000529355 RIMS1Q86UR5 1692 aaKnown RBP2.57□□□□□ -2
CTR9-204ENST00000529355 CABIN1Q9Y6J0 2220 aa2.56□□□□□ -2
CTR9-204ENST00000529355 IGLV4-60A0A075B6I1 120 aa2.56□□□□□ -2
CTR9-204ENST00000529355 IGKV6-21A0A0C4DH24 114 aa2.56□□□□□ -2
CTR9-204ENST00000529355 IGHV5-51A0A0C4DH38 117 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CCDC182A6NF36 153 aa2.56□□□□□ -2
CTR9-204ENST00000529355 COLCA2A8K830 154 aa2.56□□□□□ -2
CTR9-204ENST00000529355 E5RI56 91 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CXCL11O14625 94 aa2.56□□□□□ -2
CTR9-204ENST00000529355 GOSR2O14653 212 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CIB2O75838 187 aa2.56□□□□□ -2
CTR9-204ENST00000529355 ATP6V1G2O95670 118 aa2.56□□□□□ -2
CTR9-204ENST00000529355 RAB3DO95716 219 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CSTAP01040 98 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CALB1P05937 261 aa2.56□□□□□ -2
CTR9-204ENST00000529355 ANXA5P08758 320 aa2.56□□□□□ -2
CTR9-204ENST00000529355 FAM228BP0C875 321 aa2.56□□□□□ -2
CTR9-204ENST00000529355 MX1P20591 662 aa2.56□□□□□ -2
CTR9-204ENST00000529355 VHLP40337 213 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CDK9P50750 372 aaKnown RBP2.56□□□□□ -2
CTR9-204ENST00000529355 AP2S1P53680 142 aaPredicted RBP2.56□□□□□ -2
CTR9-204ENST00000529355 ATP5IP56385 69 aaPredicted RBP2.56□□□□□ -2
CTR9-204ENST00000529355 GPX6P59796 221 aa2.56□□□□□ -2
CTR9-204ENST00000529355 SPCS3P61009 180 aa2.56□□□□□ -2
CTR9-204ENST00000529355 SKP1P63208 163 aa2.56□□□□□ -2
CTR9-204ENST00000529355 STX5Q13190 355 aa2.56□□□□□ -2
CTR9-204ENST00000529355 ART3Q13508 389 aa2.56□□□□□ -2
CTR9-204ENST00000529355 C16orf72Q14CZ0 275 aa2.56□□□□□ -2
CTR9-204ENST00000529355 USF2Q15853 346 aaPredicted RBP2.56□□□□□ -2
CTR9-204ENST00000529355 ABCA11PQ4W5N1 156 aa2.56□□□□□ -2
CTR9-204ENST00000529355 XKR4Q5GH76 650 aa2.56□□□□□ -2
CTR9-204ENST00000529355 PRAMEF20Q5VT98 475 aa2.56□□□□□ -2
CTR9-204ENST00000529355 DUPD1Q68J44 220 aa2.56□□□□□ -2
CTR9-204ENST00000529355 DUX4L9Q6RFH8 374 aaPredicted RBP2.56□□□□□ -2
CTR9-204ENST00000529355 ZNF493Q6ZR52 646 aa2.56□□□□□ -2
CTR9-204ENST00000529355 SLC25A48Q6ZT89 311 aaKnown RBP2.56□□□□□ -2
CTR9-204ENST00000529355 NIPA1Q7RTP0 329 aa2.56□□□□□ -2
CTR9-204ENST00000529355 TAC4Q86UU9 113 aa2.56□□□□□ -2
CTR9-204ENST00000529355 BBS7Q8IWZ6 715 aa2.56□□□□□ -2
CTR9-204ENST00000529355 C12orf29Q8N999 325 aa2.56□□□□□ -2
CTR9-204ENST00000529355 OR2L3Q8NG85 312 aa2.56□□□□□ -2
CTR9-204ENST00000529355 RNASE11Q8TAA1 199 aaKnown RBP2.56□□□□□ -2
CTR9-204ENST00000529355 GRPEL2Q8TAA5 225 aa2.56□□□□□ -2
CTR9-204ENST00000529355 FRZBQ92765 325 aa2.56□□□□□ -2
CTR9-204ENST00000529355 OTUB2Q96DC9 234 aa2.56□□□□□ -2
CTR9-204ENST00000529355 ZNF578Q96N58 590 aaPredicted RBP2.56□□□□□ -2
CTR9-204ENST00000529355 OR2A5Q96R48 311 aa2.56□□□□□ -2
CTR9-204ENST00000529355 NUP58Q9BVL2 599 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CHID1Q9BWS9 393 aa2.56□□□□□ -2
CTR9-204ENST00000529355 TEKT3Q9BXF9 490 aa2.56□□□□□ -2
CTR9-204ENST00000529355 MFFQ9GZY8 342 aa2.56□□□□□ -2
CTR9-204ENST00000529355 EXO5Q9H790 373 aa2.56□□□□□ -2
CTR9-204ENST00000529355 FN3KRPQ9HA64 309 aa2.56□□□□□ -2
CTR9-204ENST00000529355 PARVAQ9NVD7 372 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CMTM6Q9NX76 183 aa2.56□□□□□ -2
CTR9-204ENST00000529355 CYB5R1Q9UHQ9 305 aa2.56□□□□□ -2
CTR9-204ENST00000529355 SLC22A14Q9Y267 594 aa2.56□□□□□ -2
CTR9-204ENST00000529355 PHLPP2Q6ZVD8 1323 aa2.56□□□□□ -2
CTR9-204ENST00000529355 TONSLQ96HA7 1378 aa2.56□□□□□ -2
CTR9-204ENST00000529355 RAB3GAP2Q9H2M9 1393 aa2.56□□□□□ -2
CTR9-204ENST00000529355 FHOD3Q2V2M9 1422 aa2.56□□□□□ -2
CTR9-204ENST00000529355 MYOM3Q5VTT5 1437 aa2.56□□□□□ -2
CTR9-204ENST00000529355 GOLGA3Q08378 1498 aa2.56□□□□□ -2
CTR9-204ENST00000529355 FYCO1Q9BQS8 1478 aa2.56□□□□□ -2
CTR9-204ENST00000529355 GPATCH8Q9UKJ3 1502 aaKnown RBP2.56□□□□□ -2
CTR9-204ENST00000529355 ABCA5Q8WWZ7 1642 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms