RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ERFP50548 548 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 MVKQ03426 396 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 CCNIQ14094 377 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 GK2Q14410 553 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR2T2Q6IF00 324 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 LYPD4Q6UWN0 246 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 SHFQ7M4L6 423 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 HS3ST5Q8IZT8 346 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 IQCF1Q8N6M8 205 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF283Q8N7M2 679 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR6K6Q8NGW6 343 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR5K1Q8NHB7 308 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 ST7LQ8TDW4 575 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 RAB39BQ96DA2 213 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 SLAMF6Q96DU3 332 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 KCNJ15Q99712 375 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 SLC30A2Q9BRI3 323 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 TOR3AQ9H497 397 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 NARFLQ9H6Q4 476 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 SLC25A19Q9HC21 320 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 TMEM100Q9NV29 134 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 TREM2Q9NZC2 230 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 TMEFF2Q9UIK5 374 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 JMJD1CQ15652 2540 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 FAM183AA6NL82 134 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 KIAA1324LA8MWY0 1029 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 FAM157AC9JC47 383 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF878C9JN71 531 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 PRR23D1E9PI22 279 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 PRODHO43272 600 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 PRR23D2P0DMB1 279 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 PSKH1P11801 424 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 GSTT1P30711 240 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 SLC15A1P46059 708 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 CRISP1P54107 249 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 GRB2P62993 217 aaKnown RBP10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 TAF13Q15543 124 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 ATP6AP1Q15904 470 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 CR1LQ2VPA4 569 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 SPRNQ5BIV9 151 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 SLC35D3Q5M8T2 416 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 AVPI1Q5T686 147 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 C1orf146Q5VVC0 180 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 FAHD1Q6P587 224 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 PGAP1Q75T13 922 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 GLCCI1Q86VQ1 547 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR5AS1Q8N127 324 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 PARP8Q8N3A8 854 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR51F2Q8NH61 342 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 ITLN1Q8WWA0 313 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR2V2Q96R30 315 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 INTS14Q96SY0 518 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 COPS4Q9BT78 406 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 REPIN1Q9BWE0 567 aaKnown RBP10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 SLC22A4Q9H015 551 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF665Q9H7R5 613 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 SP140LQ9H930 580 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 MED20Q9H944 212 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 PAPOLBQ9NRJ5 636 aaKnown RBP10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 CENPMQ9NSP4 180 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 TMEM106BQ9NUM4 274 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 AP4S1Q9Y587 144 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 NPTNQ9Y639 398 aa10.24□□□□□ -0.77
TRAPPC4-209ENST00000528230 TRAV20A0A0B4J274 112 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 IGHV2-5P01817 119 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 APOC1P02654 83 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 MSMBP08118 114 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 FCGR1AP12314 374 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 SRD5A1P18405 259 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 FASP25445 335 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 SLC6A9P48067 706 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 SRP9P49458 86 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 ESRRGP62508 458 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 EIF2B1Q14232 305 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF181Q2M3W8 571 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 PLBD1Q6P4A8 553 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 MRPL21Q7Z2W9 205 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 DPY19L4Q7Z388 723 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 ERI1Q8IV48 349 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 CPOQ8IVL8 374 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 TIGD4Q8IY51 512 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 CELF2-AS1Q8N7Q2 184 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF454Q8N9F8 522 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 RNF133Q8WVZ7 376 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 TMEM186Q96B77 213 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 OTULINQ96BN8 352 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 PLEKHA8Q96JA3 519 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 ABHD6Q9BV23 337 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR51V1Q9H2C8 321 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 OPA3Q9H6K4 179 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 GCM1Q9NP62 436 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 KIF17Q9P2E2 1029 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 PPP1R3CQ9UQK1 317 aa10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 NOP16Q9Y3C1 178 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-209ENST00000528230 G3V2T6 193 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 MLNRO43193 412 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 XRCC2O43543 280 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 FSTL3O95633 263 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 IGHV2-70P01814 119 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 CPT2P23786 658 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms