RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 IRF2P14316 349 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 CFHR2P36980 270 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 CD200P41217 278 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 OMPP47874 163 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 CENPAP49450 140 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 KRTAP10-3P60369 221 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 LIPEQ05469 1076 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 MPPED2Q15777 294 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 PRAMEF6Q5VXH4 476 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 CGB2Q6NT52 195 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 PGM2L1Q6PCE3 622 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 ERGIC1Q969X5 290 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 RSRC1Q96IZ7 334 aaKnown RBP19.57■□□□□ 0.72
CPSF1-202ENST00000527827 TBX15Q96SF7 602 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 AP3M1Q9Y2T2 418 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 A0A0G2JK05 382 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 CLPSL1A2RUU4 121 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 TNFRSF13BO14836 293 aaPredicted RBP19.56■□□□□ 0.72
CPSF1-202ENST00000527827 SERPINA1P01009 418 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 MMP9P14780 707 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 DBPQ10586 325 aaPredicted RBP19.56■□□□□ 0.72
CPSF1-202ENST00000527827 BRICD5Q6PL45 260 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 DPY19L2P2Q6ZN68 376 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 CFAP77Q6ZQR2 320 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 ARPINQ7Z6K5 226 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 CYP4Z1Q86W10 505 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 OR11L1Q8NGX0 322 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 FAM71F1Q96KD3 344 aaPredicted RBP19.56■□□□□ 0.72
CPSF1-202ENST00000527827 UFSP2Q9NUQ7 469 aa19.56■□□□□ 0.72
CPSF1-202ENST00000527827 CENPVL3A0A0U1RRI6 287 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 A0A1W2PRQ8 180 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 ZNF879B4DU55 563 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 P2RY10O00398 339 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 PPP1R3DO95685 299 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 H1F0P07305 194 aaKnown RBP19.55■□□□□ 0.72
CPSF1-202ENST00000527827 TROVE2P10155 538 aaKnown RBP eCLIP19.55■□□□□ 0.728e-9■■■■□ 22.1
CPSF1-202ENST00000527827 CRABP1P29762 137 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 NPY4RP50391 375 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 DGCR6Q14129 220 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 NAA40Q86UY6 237 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 SLC26A10Q8NG04 563 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 TECTBQ96PL2 329 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 CCT8L2Q96SF2 557 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 B9D1Q9UPM9 204 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 POMT1Q9Y6A1 747 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 CAPN7Q9Y6W3 813 aa19.55■□□□□ 0.72
CPSF1-202ENST00000527827 F5H5K5 113 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 NME4O00746 187 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 GSTA4O15217 222 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 RPS6KA3P51812 740 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 SEC23BQ15437 767 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 SLC18B1Q6NT16 456 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 DNM1P34Q6PK57 102 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 LINC00346Q8IVM7 164 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 OR6V1Q8N148 313 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 SLCO4A1Q96BD0 722 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 SRA1Q9HD15 236 aaKnown RBP19.54■□□□□ 0.72
CPSF1-202ENST00000527827 FGFR1OP2Q9NVK5 253 aa19.54■□□□□ 0.72
CPSF1-202ENST00000527827 TRBV4-1A0A0J9YWV2 114 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 UNC119BA6NIH7 251 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 TOX4O94842 621 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 MDH1P40925 334 aaKnown RBP19.53■□□□□ 0.72
CPSF1-202ENST00000527827 FGD3Q5JSP0 725 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 CD276Q5ZPR3 534 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 ZNF620Q6ZNG0 422 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 WDFY2Q96P53 400 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 ATF6BQ99941 703 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 MMP27Q9H306 513 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 MMADHCQ9H3L0 296 aaPredicted RBP19.53■□□□□ 0.72
CPSF1-202ENST00000527827 PNRC2Q9NPJ4 139 aaKnown RBP19.53■□□□□ 0.72
CPSF1-202ENST00000527827 NDUFAF4Q9P032 175 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 ARMCX1Q9P291 453 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 ERVK-18Q9QC07 812 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 RNF7Q9UBF6 113 aa19.53■□□□□ 0.72
CPSF1-202ENST00000527827 M0QZ24 198 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 LGALS8O00214 317 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 LCATP04180 440 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 LIPFP07098 398 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 GSK3BP49841 420 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 SLC7A2P52569 658 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 TRAP1Q12931 704 aaKnown RBP19.52■□□□□ 0.72
CPSF1-202ENST00000527827 SFRP4Q6FHJ7 346 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-202ENST00000527827 ASPHD2Q6ICH7 369 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 SMARCD3Q6STE5 483 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 PGAP1Q75T13 922 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 SSMEM1Q8WWF3 244 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 ERMAPQ96PL5 475 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-202ENST00000527827 NMNAT3Q96T66 252 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 PITX2Q99697 317 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 SMURF1Q9HCE7 757 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 KIF17Q9P2E2 1029 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 AURKCQ9UQB9 309 aa19.52■□□□□ 0.72
CPSF1-202ENST00000527827 TIMM23O14925 209 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 SLC22A2O15244 555 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 FCN3O75636 299 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 PTBP3O95758 552 aaKnown RBP19.51■□□□□ 0.71
CPSF1-202ENST00000527827 CA6P23280 308 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 RPL15P61313 204 aaKnown RBP19.51■□□□□ 0.71
CPSF1-202ENST00000527827 ECH1Q13011 328 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 MALLQ13021 153 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms