RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 M0R1B8 84 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 ERP29P30040 261 aaKnown RBP13.46□□□□□ -0.25
USP47-207ENST00000527733 FGF9P31371 208 aaPredicted RBP13.46□□□□□ -0.25
USP47-207ENST00000527733 UQCRC1P31930 480 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 INSM1Q01101 510 aaPredicted RBP13.46□□□□□ -0.25
USP47-207ENST00000527733 MESTQ5EB52 335 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 ANKRD16Q6P6B7 361 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 IDO2Q6ZQW0 420 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 EMG1Q92979 244 aaKnown RBP13.46□□□□□ -0.25
USP47-207ENST00000527733 C4orf45Q96LM5 186 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 AQP7P3A6NL99 342 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 BET1O15155 118 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 PLPP2O43688 288 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 PMS2P2O95744 297 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 TGIF1Q15583 401 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 OR6S1Q8NH40 331 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 PP6455Q8WZ26 134 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 HYLS1Q96M11 299 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 PRSS27Q9BQR3 290 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 ARL6Q9H0F7 186 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 RP1P56715 2156 aa13.46□□□□□ -0.25
USP47-207ENST00000527733 A0A0G2JMP0 313 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 GFRA3O60609 400 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 ACTL6BO94805 426 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 GABRA1P14867 456 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 ZNF17P17021 662 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 ALOX5APP20292 161 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 OR10A3P58181 314 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 CTF1Q16619 201 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 TATDN3Q17R31 274 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 PLPPR5Q32ZL2 321 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 SLC22A25Q6T423 547 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 LHFPL2Q6ZUX7 228 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 GPR155Q7Z3F1 870 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 OR4M2Q8NGB6 313 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 PTP4A1Q93096 173 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 PTTG3PQ9NZH4 202 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 COL4A6Q14031 1691 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 ACACAQ13085 2346 aa13.46□□□□□ -0.26
USP47-207ENST00000527733 ZSCAN5BA6NJL1 495 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 GOSR2O14653 212 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 RP2O75695 350 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 IGKV3-11P04433 115 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 ZNF32P17041 273 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 NUBP1P53384 320 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 DLX5P56178 289 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 WDR38Q5JTN6 314 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 SLC25A30Q5SVS4 291 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 ZNF573Q86YE8 665 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 SIAH3Q8IW03 269 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 C12orf45Q8N5I9 185 aaPredicted RBP13.45□□□□□ -0.26
USP47-207ENST00000527733 ZNF416Q9BWM5 594 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 AICDAQ9GZX7 198 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 OPA3Q9H6K4 179 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 MRPS18BQ9Y676 258 aaKnown RBP13.45□□□□□ -0.26
USP47-207ENST00000527733 ATP23Q9Y6H3 246 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 H7C1Q1 480 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 TMEM127O75204 238 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 ZFPL1O95159 310 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 GAAP10253 952 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 FABP6P51161 128 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 UCNP55089 124 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 CLVS2Q5SYC1 327 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 ZNF574Q6ZN55 896 aaPredicted RBP13.45□□□□□ -0.26
USP47-207ENST00000527733 FAM131CQ96AQ9 280 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 ORAI1Q96D31 301 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 ANGPTL4Q9BY76 406 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 GLRX2Q9NS18 164 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 ALG5Q9Y673 324 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 CCDC88CQ9P219 2028 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 DSPPQ9NZW4 1301 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 NKX2-8O15522 239 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 FADS1O60427 444 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 EPPINO95925 133 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 FAM117AQ9C073 453 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 ZNF816-ZNF321PA0A0X1KG74 233 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 TMEM82A0PJX8 343 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 GABARAPH6UMI1 98 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 TBX6O95947 436 aaPredicted RBP13.45□□□□□ -0.26
USP47-207ENST00000527733 TFP02787 698 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 S100A1P23297 94 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 CCR9P51686 369 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 PCOLCEQ15113 449 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 OCSTAMPQ9BR26 566 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 HINT2Q9BX68 163 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 BARHL1Q9BZE3 327 aa13.45□□□□□ -0.26
USP47-207ENST00000527733 PEX14O75381 377 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 FAHP16930 419 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 GALP22466 123 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 ETFDHQ16134 617 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 CDONQ4KMG0 1287 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 PAN3Q58A45 887 aaKnown RBP13.44□□□□□ -0.26
USP47-207ENST00000527733 AGAP6Q5VW22 663 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 MEX3BQ6ZN04 569 aaKnown RBP13.44□□□□□ -0.26
USP47-207ENST00000527733 EGFL6Q8IUX8 553 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 OR10K1Q8NGX5 313 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 OR2M2Q96R28 347 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 OR2S2Q9NQN1 319 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 GNG12Q9UBI6 72 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms