RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ST7LQ8TDW4 575 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 RNF133Q8WVZ7 376 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNRF4Q8WWF5 429 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 RDH5Q92781 318 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 HAVCR1Q96D42 359 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 CMBLQ96DG6 245 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ELMOD3Q96FG2 381 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TIMD4Q96H15 378 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 PGAM5Q96HS1 289 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 COX4I2Q96KJ9 171 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 HRASLS5Q96KN8 279 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 Q96MT0 163 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMUB1Q9BVT8 246 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 C1QTNF5Q9BXJ0 243 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 MROQ9BYG7 248 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 REG4Q9BYZ8 158 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC22A4Q9H015 551 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR10A2Q9H208 303 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 VCX3BQ9H321 246 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 RGCCQ9H4X1 137 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 DCLRE1BQ9H816 532 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 CHODLQ9H9P2 273 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 PNRC2Q9NPJ4 139 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 DLL4Q9NR61 685 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 CLN6Q9NWW5 311 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 SMPD3Q9NY59 655 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 DNAJC27Q9NZQ0 273 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 MYEF2Q9P2K5 600 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF391Q9UJN7 358 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 GTF2A1LQ9UNN4 478 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 STARD10Q9Y365 291 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ANKRD17O75179 2603 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 RAI1Q7Z5J4 1906 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 CENPEQ02224 2701 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 CELSR2Q9HCU4 2923 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 IGHV4-30-2A0A087WSY4 118 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 CCDC182A6NF36 153 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZSCAN5BA6NJL1 495 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ACOD1A6NK06 481 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 LRRC30A6NM36 301 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ANKRD30BLA7E2S9 258 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 IQCF6A8MYZ5 107 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 CLDN25C9JDP6 229 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ANKRD65E5RJM6 399 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 IFNL4K9M1U5 179 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 PPIHO43447 177 aaKnown RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 LY6HO94772 140 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 IGHV1-46P01743 117 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 KRT8P05787 483 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC2A1P11166 492 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 IRF2P14316 349 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ALOX5APP20292 161 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ACHEP22303 614 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 USF1P22415 310 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 EPHA2P29317 976 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OTX1P32242 354 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 POLR2IP36954 125 aaKnown RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 GNALP38405 381 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 DDOSTP39656 456 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OPRL1P41146 370 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 NR4A2P43354 598 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 MAGEB1P43366 347 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 GPR6P46095 362 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 MTNR1AP48039 350 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 MMP15P51511 669 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 CHN2P52757 468 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF121P58317 390 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 PSMA6P60900 246 aaKnown RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 SNRPGP62308 76 aaKnown RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 EGR3Q06889 387 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 GK2Q14410 553 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 HLXQ14774 488 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR8G1Q15617 311 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 MSMPQ1L6U9 139 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 KRTAP27-1Q3LI81 207 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 GLYATL3Q5SZD4 288 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 AADACL4Q5VUY2 407 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 TTC23Q5W5X9 447 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR2T2Q6IF00 324 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 DEGS2Q6QHC5 323 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF322Q6U7Q0 402 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 LRRN1Q6UXK5 716 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 CLEC9AQ6UXN8 241 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 COLCA1Q6ZS62 124 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 USP51Q70EK9 711 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 FAM57BQ71RH2 274 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR5AS1Q8N127 324 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZCCHC24Q8N2G6 241 aaKnown RBP4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 GALNT4Q8N4A0 578 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 BHLHE23Q8NDY6 225 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 SETD9Q8NE22 299 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR8G5Q8NG78 346 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR10H4Q8NGA5 316 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR51G2Q8NGK0 314 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR10S1Q8NGN2 331 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 C10orf105Q8TEF2 133 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 CYGBQ8WWM9 190 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 RAB1CQ92928 201 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 REEP6Q96HR9 211 aa4.61□□□□□ -1.67
HMGB1P40-201ENST00000525121 MBOAT4Q96T53 435 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms