RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 H3BQF6 201 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 hCG_2039718K7EN88 272 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ARPC1BO15143 372 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 TM9SF1O15321 606 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ENSAO43768 121 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 CST8O60676 142 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TBX19O60806 448 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 PTP4A3O75365 173 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MRPL33O75394 65 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 AK1P00568 194 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 RENP00797 406 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 PTHP01270 115 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SERPING1P05155 500 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 HSP90AA1P07900 732 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 KRT16P08779 473 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 FBP1P09467 338 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 GIG44P09565 113 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 CCDC175P0C221 793 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NPIPA8P0DM63 369 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NEFHP12036 1026 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF35P13682 527 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 PORP16435 677 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 PSMB4P28070 264 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 IL12BP29460 328 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 CTNNA1P35221 906 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 MDH2P40926 338 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 MAGEA3P43357 314 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SLC6A8P48029 635 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SLC9A3P48764 834 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 CCT3P49368 545 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 RGS6P49758 472 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 EMDP50402 254 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF41P51814 821 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 HNRNPFP52597 415 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 MFAP4P55083 255 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 CARD18P57730 90 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 RAB8AP61006 207 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ATP6V0D1P61421 351 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NAA20P61599 178 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 LYZP61626 148 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 HERVK_113P63132 956 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ERVK-8P63133 956 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 BTN3A2P78410 334 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SARNPP82979 210 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 ARF1P84077 181 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 SRYQ05066 204 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MFGE8Q08431 387 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 KLHL30Q0D2K2 578 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 KCNJ11Q14654 390 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 CRYMQ14894 314 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SLC17A1Q14916 467 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF146Q15072 292 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 KRT31Q15323 416 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TOMM20Q15388 145 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TRIP13Q15645 432 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 KCNJ8Q15842 424 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 PDK4Q16654 411 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 EXOC3L2Q2M3D2 409 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MS4A18Q3C1V0 323 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ODF2Q5BJF6 829 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ACSBG2Q5FVE4 666 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF311Q5JNZ3 666 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 HBMQ6B0K9 141 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 DHRS7BQ6IAN0 325 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 OR4C11Q6IEV9 310 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SULT1C3Q6IMI6 304 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MFSD12Q6NUT3 480 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SLC48A1Q6P1K1 146 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 FAM173BQ6P4H8 233 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 C5orf46Q6UWT4 87 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 UNQ9370/PRO34162Q6UXP9 181 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TMEM64Q6YI46 380 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MBOAT1Q6ZNC8 495 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 RBM43Q6ZSC3 357 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 RNF165Q6ZSG1 346 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TMPPEQ6ZT21 453 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 CYS1Q717R9 158 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 APTXQ7Z2E3 356 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF571Q7Z3V5 609 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 NUFIP2Q7Z417 695 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 THOC6Q86W42 341 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 LRRC28Q86X40 367 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 TUSC5Q8IXB3 177 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF101Q8IZC7 436 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 OR2L13Q8N349 312 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 GPR137CQ8N3F9 429 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 COMMD1Q8N668 190 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NATD1Q8N6N6 113 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SDR9C7Q8NEX9 313 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 OR4K14Q8NGD5 310 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 OR51D1Q8NGF3 324 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 OR5T2Q8NGG2 359 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 OR52E2Q8NGJ4 325 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 OR4C13Q8NGP0 309 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 RHOXF1Q8NHV9 184 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 RHEBL1Q8TAI7 183 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ST7LQ8TDW4 575 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ABHD3Q8WU67 409 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 DCAKDQ8WVC6 231 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SKA2Q8WVK7 121 aaPredicted RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms