RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	MMP25	Q9NPA2	562 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	IFT46	Q9NQC8	304 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	SEMA5B	Q9P283	1151 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	RARRES3	Q9UL19	164 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	TNFSF18	Q9UNG2	199 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	ERVK-19	Q9WJR5	959 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	PRELID3B	Q9Y3B1	194 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	EXPH5	Q8NEV8	1989 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	RP1	P56715	2156 aa		6.98	□□□□□ -1.29
SPIDR-223	ENST00000524033	MAST4	O15021	2626 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033		A0A0A6YYH2	397 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033		A0A0D9SG52	128 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033		A0A1B0GTH9	108 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	RNF222	A6NCQ9	220 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033		A6NJ64	397 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	FAM171A2	A8MVW0	826 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	C2orf74	A8MZ97	194 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	HRK	O00198	91 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	BCL2L11	O43521	198 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	HCRTR1	O43613	425 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	RDH16	O75452	317 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	SRSF10	O75494	262 aa	Known RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	TSPAN9	O75954	239 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR2F2	O95006	317 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	RPP14	O95059	124 aa	Known RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	IGHM	P01871	453 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	BGLAP	P02818	100 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ITGA5	P08648	1049 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	CT45A8	P0DMV1	189 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	CT45A9	P0DMV2	189 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	GTF2F2	P13984	249 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	AGTR1	P30556	359 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	GALNS	P34059	522 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	CASR	P41180	1078 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	TAS2R19	P59542	299 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	CTXN1	P60606	82 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ACTB	P60709	375 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	UBE2M	P61081	183 aa	Known RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ACTG1	P63261	375 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ACY1	Q03154	408 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	RPL18	Q07020	188 aa	Known RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR2F1	Q13607	317 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	IGFBP7	Q16270	282 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	CT45A2	Q5DJT8	189 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	PABPC1L2A	Q5JQF8	200 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ATPAF1	Q5TC12	328 aa	Predicted RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	YOD1	Q5VVQ6	348 aa	Predicted RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	WBP2NL	Q6ICG8	309 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	CDPF1	Q6NVV7	123 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	STEAP1B	Q6NZ63	245 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033		Q6ZS46	218 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	KMT5C	Q86Y97	462 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	GALNT16	Q8N428	558 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	C12orf45	Q8N5I9	185 aa	Predicted RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF615	Q8N8J6	731 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	CLRN3	Q8NCR9	226 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR51D1	Q8NGF3	324 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR5T2	Q8NGG2	359 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	OR51A4	Q8NGJ6	313 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF519	Q8TB69	540 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ADAMTS18	Q8TE60	1221 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	RNF128	Q8TEB7	428 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	CCDC107	Q8WV48	283 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	MARC2	Q969Z3	335 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	FAM3D	Q96BQ1	224 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ZNF524	Q96C55	264 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	PHYHIPL	Q96FC7	376 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	ADAD1	Q96M93	576 aa	Known RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	MOGAT1	Q96PD6	335 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	TSSK2	Q96PF2	358 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	AMELY	Q99218	206 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	LPAR4	Q99677	370 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	MAP3K3	Q99759	626 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	SLC25A21	Q9BQT8	299 aa	Predicted RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	GPR87	Q9BY21	358 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	WDR13	Q9H1Z4	485 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	KCNK15	Q9H427	330 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033		Q9N2J8	555 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	FGF21	Q9NSA1	209 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	SLC2A8	Q9NY64	477 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	UPB1	Q9UBR1	384 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	FBXL2	Q9UKC9	423 aa		6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	TLN1	Q9Y490	2541 aa	Known RBP	6.97	□□□□□ -1.29
SPIDR-223	ENST00000524033	TRAV18	A0A075B6X5	111 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033		A0A1B0GW55	424 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	LOC390937	A0A1W2PQ73	354 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	TMEM82	A0PJX8	343 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	TLCD2	A6NGC4	264 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	TVP23A	A6NH52	213 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	C21orf140	B9A014	251 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	MKRN2OS	H3BPM6	223 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	SULT2B1	O00204	365 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	FGF16	O43320	207 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	OR10H2	O60403	315 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	REN	P00797	406 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	MAS1	P04201	325 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	CD3D	P04234	171 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	OR4E1	P0C645	316 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	DUX4L2	P0CJ85	424 aa		6.96	□□□□□ -1.3
SPIDR-223	ENST00000524033	DUX4L3	P0CJ86	424 aa		6.96	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms