RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 IMP4Q96G21 291 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 PACRGQ96M98 296 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 HARBI1Q96MB7 349 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF599Q96NL3 588 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 MUC4Q99102 2169 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 HOPXQ9BPY8 73 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 APOL2Q9BQE5 337 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 MCRIP2Q9BUT9 160 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 RACGAP1Q9H0H5 632 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 DEFB127Q9H1M4 99 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 WDR41Q9HAD4 459 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 CDH20Q9HBT6 801 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 POPDC3Q9HBV1 291 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 SH2D2AQ9NP31 389 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ABCB10Q9NRK6 738 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ACOXLQ9NUZ1 547 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 TMEM45AQ9NWC5 275 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 MED29Q9NX70 200 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 IKZF3Q9UKT9 509 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ABCG2Q9UNQ0 655 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ICKQ9UPZ9 632 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 TBL2Q9Y4P3 447 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 DNAH11Q96DT5 4516 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 A0A1W2PPK0 400 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PRSS37A4D1T9 235 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PINLYPA6NC86 204 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 BBIP1A8MTZ0 92 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 TXNDC9O14530 226 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 STX7O15400 261 aaKnown RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 CFLARO15519 480 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 EMC8O43402 210 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 XRCC3O43542 346 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 GMDSO60547 372 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PROP1O75360 226 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 KRT75O95678 551 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 UBCP0CG48 685 aaKnown RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 CBR1P16152 277 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 FPR3P25089 353 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 DUSP1P28562 367 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PRDX3P30048 256 aaKnown RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 MAS1LP35410 378 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 AHRP35869 848 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 CD79BP40259 229 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 AQP2P41181 271 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 MAGEA2P43356 314 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 RPL5P46777 297 aaKnown RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 NPBWR2P48146 333 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 AP1S2P56377 157 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 TAS2R39P59534 338 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PLP1P60201 277 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PSME3P61289 254 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 HPCAP84074 193 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 NAAAQ02083 359 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 IL10RBQ08334 325 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 IHHQ14623 411 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 SLC17A1Q14916 467 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 TRAM2Q15035 370 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PPP1R3AQ16821 1122 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PARP15Q460N3 678 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 GTDC1Q4AE62 458 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 LINC01620Q4KN68 170 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 TEX30Q5JUR7 227 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 OGFRL1Q5TC84 451 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 OR52E8Q6IFG1 317 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 MFSD12Q6NUT3 480 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 ULK3Q6PHR2 472 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 HACD2Q6Y1H2 254 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF841Q6ZN19 808 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 ABHD13Q7L211 337 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 BCDIN3DQ7Z5W3 292 aaKnown RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PRSS58Q8IYP2 241 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 SLC38A6Q8IZM9 456 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 MUC20Q8N307 709 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 METTL27Q8N6F8 245 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 NPWQ8N729 165 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 HORMAD2Q8N7B1 307 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 OR7G2Q8NG99 324 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 OR6Q1Q8NGQ2 317 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 NUBPLQ8TB37 319 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 STAG3L4Q8TBR4 150 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 HM13Q8TCT9 377 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 KCTD4Q8WVF5 259 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PIH1D2Q8WWB5 315 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PYDC1Q8WXC3 89 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 POP5Q969H6 163 aaKnown RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 MYDGFQ969H8 173 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.41□□□□□ -1.73e-7■□□□□ 8.8
PABPC1-223ENST00000523636 CXorf40BQ96DE9 158 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 DGCR14Q96DF8 476 aaKnown RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 PIK3IP1Q96FE7 263 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF778Q96MU6 729 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 VSTM2LQ96N03 204 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 AMDHD1Q96NU7 426 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 OR52B2Q96RD2 323 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 DPH7Q9BTV6 452 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 RIOK2Q9BVS4 552 aaKnown RBP4.41□□□□□ -1.7
PABPC1-223ENST00000523636 SLC22A4Q9H015 551 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 DPAGT1Q9H3H5 408 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 C1orf198Q9H425 327 aa4.41□□□□□ -1.7
PABPC1-223ENST00000523636 CAB39LQ9H9S4 337 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms