RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 IFNW1P05000 195 aa18.8■□□□□ 0.6
PVT1-218ENST00000523328 GK2Q14410 553 aaPredicted RBP18.8■□□□□ 0.6
PVT1-218ENST00000523328 MEP1BQ16820 701 aa18.8■□□□□ 0.6
PVT1-218ENST00000523328 KRTAP27-1Q3LI81 207 aa18.8■□□□□ 0.6
PVT1-218ENST00000523328 COQ5Q5HYK3 327 aa18.8■□□□□ 0.6
PVT1-218ENST00000523328 METTL21CQ5VZV1 264 aa18.8■□□□□ 0.6
PVT1-218ENST00000523328 Q6ZSV7 163 aa18.8■□□□□ 0.6
PVT1-218ENST00000523328 PTCHD4Q6ZW05 846 aa18.8■□□□□ 0.6
PVT1-218ENST00000523328 ZSCAN4Q8NAM6 433 aaPredicted RBP18.8■□□□□ 0.6
PVT1-218ENST00000523328 POLR1DQ9Y2S0 133 aa18.8■□□□□ 0.6
PVT1-218ENST00000523328 A0A0U1RQK1 487 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 PTP4A3O75365 173 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 METTL11BQ5VVY1 283 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 GPR139Q6DWJ6 353 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 SFRP4Q6FHJ7 346 aaPredicted RBP18.79■□□□□ 0.6
PVT1-218ENST00000523328 CORO6Q6QEF8 472 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 PNLDC1Q8NA58 520 aaKnown RBP18.79■□□□□ 0.6
PVT1-218ENST00000523328 OR2T12Q8NG77 320 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 LZICQ8WZA0 190 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 LHX4Q969G2 390 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 GPX7Q96SL4 187 aaPredicted RBP18.79■□□□□ 0.6
PVT1-218ENST00000523328 RPS6KA6Q9UK32 745 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 SIGLEC7Q9Y286 467 aa18.79■□□□□ 0.6
PVT1-218ENST00000523328 A0A0G2JND7 137 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 LGALS8O00214 317 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 DCTN6O00399 190 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 SOCS2O14508 198 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 MRASO14807 208 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 FCN3O75636 299 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 NDUFB2O95178 105 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 COX10Q12887 443 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 HIST2H2BDQ6DRA6 164 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 ADCK1Q86TW2 530 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 FAM110DQ8TAY7 271 aaPredicted RBP18.78■□□□□ 0.6
PVT1-218ENST00000523328 ATP6V1G3Q96LB4 118 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 TSSK2Q96PF2 358 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 RNF7Q9UBF6 113 aa18.78■□□□□ 0.6
PVT1-218ENST00000523328 TET2Q6N021 2002 aaPredicted RBP18.78■□□□□ 0.6
PVT1-218ENST00000523328 ADAM20O43506 726 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 PTBP3O95758 552 aaKnown RBP18.77■□□□□ 0.6
PVT1-218ENST00000523328 ACSM4P0C7M7 580 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 CDKN2AP42771 156 aaKnown RBP18.77■□□□□ 0.6
PVT1-218ENST00000523328 FXYD6P3P58550 94 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 KCNJ8Q15842 424 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 FBLN7Q53RD9 439 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 PGM2L1Q6PCE3 622 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.77■□□□□ 0.6
PVT1-218ENST00000523328 FAM46AQ96IP4 442 aaKnown RBP18.77■□□□□ 0.6
PVT1-218ENST00000523328 NDEL1Q9GZM8 345 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 RASSF4Q9H2L5 321 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 C16orf95Q9H693 158 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 INTS9Q9NV88 658 aaKnown RBP18.77■□□□□ 0.6
PVT1-218ENST00000523328 IER3IP1Q9Y5U9 82 aa18.77■□□□□ 0.6
PVT1-218ENST00000523328 ELOVL7A1L3X0 281 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 C3orf80F5H4A9 247 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 EDF1O60869 148 aaKnown RBP18.76■□□□□ 0.59
PVT1-218ENST00000523328 ARF6P62330 175 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 GDPGP1Q6ZNW5 385 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 NAA40Q86UY6 237 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 PIP4P2Q8N4L2 257 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 SCCPDHQ8NBX0 429 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 SLCO4A1Q96BD0 722 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 SIKE1Q9BRV8 207 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 FN3KRPQ9HA64 309 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 TMEM5Q9Y2B1 443 aa18.76■□□□□ 0.59
PVT1-218ENST00000523328 IGLV1-36A0A0B4J1U3 117 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 BBIP1A8MTZ0 92 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 F5H5K5 113 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 PLXNB1O43157 2135 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 PPP1R3DO95685 299 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 TXNDC12O95881 172 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 C2orf68Q2NKX9 166 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 CFAP77Q6ZQR2 320 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 PGAP1Q75T13 922 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 RRM2BQ7LG56 351 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 BOLLQ8N9W6 283 aaKnown RBP18.75■□□□□ 0.59
PVT1-218ENST00000523328 SLC7A13Q8TCU3 470 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 DPAGT1Q9H3H5 408 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 ANKRD19PQ9H560 264 aa18.75■□□□□ 0.59
PVT1-218ENST00000523328 GMPR2Q9P2T1 348 aaKnown RBP18.75■□□□□ 0.59
PVT1-218ENST00000523328 C5orf63A6NC05 138 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 NDUFA2O43678 99 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 CA6P23280 308 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 CRABP1P29762 137 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 CENPAP49450 140 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 OR8G1Q15617 311 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 OR8B8Q15620 311 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 SLC18B1Q6NT16 456 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 BTN2A1Q7KYR7 527 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 TSEN54Q7Z6J9 526 aaKnown RBP18.74■□□□□ 0.59
PVT1-218ENST00000523328 PDZD9Q8IXQ8 264 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 SPRYD4Q8WW59 207 aaPredicted RBP18.74■□□□□ 0.59
PVT1-218ENST00000523328 LRTOMTQ8WZ04 291 aa18.74■□□□□ 0.59
PVT1-218ENST00000523328 TRAV38-1A0A0B4J264 116 aa18.73■□□□□ 0.59
PVT1-218ENST00000523328 OOEPA6NGQ2 149 aa18.73■□□□□ 0.59
PVT1-218ENST00000523328 OR10H3O60404 316 aa18.73■□□□□ 0.59
PVT1-218ENST00000523328 TSPAN9O75954 239 aa18.73■□□□□ 0.59
PVT1-218ENST00000523328 MDH1P40925 334 aaKnown RBP18.73■□□□□ 0.59
PVT1-218ENST00000523328 DBPQ10586 325 aaPredicted RBP18.73■□□□□ 0.59
PVT1-218ENST00000523328 MALLQ13021 153 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms