RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 TMEM246Q9BRR3 403 aa9.85□□□□□ -0.83
CTNNA1-237ENST00000523275 FAM107BQ9H098 131 aa9.85□□□□□ -0.83
CTNNA1-237ENST00000523275 MGAM2Q2M2H8 2515 aa9.85□□□□□ -0.83
CTNNA1-237ENST00000523275 SNX3O60493 162 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 FABP3P05413 133 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 PPIAL4GP0DN37 164 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 HKR1P10072 659 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 IRF2P14316 349 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 ZNF823P16415 610 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 RRM2P31350 389 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 GATA4P43694 442 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 TPTEP56180 551 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 PRSS12P56730 875 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 GNB2P62879 340 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 TRAP1Q12931 704 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 FOXL1Q12952 345 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 TSPAN31Q12999 210 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 BAMBIQ13145 260 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 SAMD4BQ5PRF9 694 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 SLC35F1Q5T1Q4 408 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 NLRC3Q7RTR2 1065 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 CPLX4Q7Z7G2 160 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 NAA40Q86UY6 237 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 PGAM4Q8N0Y7 254 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 CELF2-AS1Q8N7Q2 184 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 OR11L1Q8NGX0 322 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 SPRYD4Q8WW59 207 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 RAB40AQ8WXH6 277 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 ERGIC1Q969X5 290 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 SLCO4A1Q96BD0 722 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 NEIL1Q96FI4 390 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 MS4A7Q9GZW8 240 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 NSRP1Q9H0G5 558 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 FN3KQ9H479 309 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 ZMAT3Q9HA38 289 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 IL1RAPQ9NPH3 570 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 PNRC2Q9NPJ4 139 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 CD300AQ9UGN4 299 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 KCNG2Q9UJ96 466 aa9.84□□□□□ -0.83
CTNNA1-237ENST00000523275 IGHV2-70DA0A0C4DH43 119 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 KIR2DS1A0A191URI9 304 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 DNAJC9-AS1A6NH13 148 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 ARPC2O15144 300 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 KRT36O76013 467 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 MTNR1AP48039 350 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 PITPNBP48739 271 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 MAB21L1Q13394 359 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 ZNF404Q494X3 552 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 FAM201AQ5SY85 155 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 PGBD2Q6P3X8 592 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 ZNF620Q6ZNG0 422 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 PGAP1Q75T13 922 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 ZDHHC21Q8IVQ6 265 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 SDR9C7Q8NEX9 313 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 OR8B3Q8NGG8 313 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 Q8TCH9 128 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 SPTSSAQ969W0 71 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 UPRTQ96BW1 309 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 MAP6Q96JE9 813 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 DUX5Q96PT3 197 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 OR8B2Q96RD0 313 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 ZNF747Q9BV97 191 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 SLC22A4Q9H015 551 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 MRPL22Q9NWU5 206 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 PCDHGB1Q9Y5G3 927 aa9.83□□□□□ -0.84
CTNNA1-237ENST00000523275 IGHV3OR16-10A0A075B7F0 116 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 CLDN34H7C241 214 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 ATP8B1O43520 1251 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 FAM20BO75063 409 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 IGHV4-38-2P0DP08 117 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 CA6P23280 308 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 PYCR1P32322 319 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 CD200P41217 278 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 HMGA2P52926 109 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 SPATS1Q496A3 300 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 CLEC12AQ5QGZ9 265 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 RPL13AP3Q6NVV1 102 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 SHISA2Q6UWI4 295 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 LYPD2Q6UXB3 125 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 DCDC5Q6ZRR9 648 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 C9orf139Q6ZV77 190 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 MRPL21Q7Z2W9 205 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 PARP8Q8N3A8 854 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 LINC00471Q8N535 108 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 CYB561A3Q8NBI2 242 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 PROKR2Q8NFJ6 384 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 OR52L1Q8NGH7 329 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 OR2T4Q8NH00 348 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 SLC25A28Q96A46 364 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 DACT3Q96B18 629 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 C1orf147Q96MC9 270 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 DDOQ99489 341 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 EGLN3Q9H6Z9 239 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 UFSP2Q9NUQ7 469 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 CLN8Q9UBY8 286 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 TAGLN3Q9UI15 199 aa9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 NOP16Q9Y3C1 178 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-237ENST00000523275 CDH10Q9Y6N8 788 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms