RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ZFP41Q8N8Y5 198 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 OR2A1Q8NGT9 310 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 PIGXQ8TBF5 258 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 OR51E1Q8TCB6 317 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 FGF14Q92915 247 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 KCTD7Q96MP8 289 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 NOL4LQ96MY1 436 aaPredicted RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 MEIS3Q99687 375 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 UGT2B28Q9BY64 529 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 KCNJ16Q9NPI9 418 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 FBXO8Q9NRD0 319 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 RARRES3Q9UL19 164 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 MYRFQ9Y2G1 1151 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 DENND4AQ7Z401 1863 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 ISPDA4D126 451 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 PRR23AA6NEV1 266 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 M0R1B8 84 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 CXCR6O00574 342 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 CRXO43186 299 aaPredicted RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 SRP72O76094 671 aaKnown RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 IFNA14P01570 189 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 ISG15P05161 165 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 OR5AL1P0C617 328 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 PGA5P0DJD9 388 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 SLC2A1P11166 492 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 ME2P23368 584 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 GRPRP30550 384 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 HRH1P35367 487 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 TGFBR2P37173 567 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 GLP1RP43220 463 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 APOC4P55056 127 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 AP1S2P56377 157 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 ZNF121P58317 390 aaPredicted RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 ERVPABLB-1P60509 514 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 RANP62826 216 aaKnown RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 SSBP2P81877 361 aaPredicted RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 ACVR1Q04771 509 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 SRSF6Q13247 344 aaKnown RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 CLINT1Q14677 625 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 TMEM30BQ3MIR4 351 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 ZNF658BQ4V348 819 aaPredicted RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 KLF17Q5JT82 389 aaPredicted RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 CCNJQ5T5M9 372 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 UBE2UQ5VVX9 321 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 SAXO2Q658L1 398 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 CNIH2Q6PI25 160 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 CD200R1LQ6Q8B3 271 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 LRRTM1Q86UE6 522 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 PIM3Q86V86 326 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 PNKDQ8N490 385 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 STPG4Q8N801 248 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 FLVCR1-AS1Q8TAF5 88 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 FAM45AQ8TCE6 357 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 AGAP11Q8TF27 550 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 SSC4DQ8WTU2 575 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 NELFBQ8WX92 580 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 PPWD1Q96BP3 646 aaKnown RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 FBXO17Q96EF6 278 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 PIK3IP1Q96FE7 263 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 PGLYRP4Q96LB8 373 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 VAT1Q99536 393 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 RNF126Q9BV68 326 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 SRXN1Q9BYN0 137 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 SLC19A3Q9BZV2 496 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 ZNF442Q9H7R0 627 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 MOB1AQ9H8S9 216 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 TMEM27Q9HBJ8 222 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 B3GAT2Q9NPZ5 323 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 TMEM9BQ9NQ34 198 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 SLC2A9Q9NRM0 540 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 SPANXB1Q9NS25 103 aaPredicted RBP3.23□□□□□ -1.89
SKP1-209ENST00000522552 PLCXD1Q9NUJ7 323 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 MSH6P52701 1360 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 TNRQ92752 1358 aa3.23□□□□□ -1.89
SKP1-209ENST00000522552 FANCIQ9NVI1 1328 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 C9orf84Q5VXU9 1444 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 A0A0G2JRQ6 117 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 TINCRA0A1B0GVN0 87 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 A6NDN8 102 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 ZNF726A6NNF4 738 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 PRAC2D3DTV9 90 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 NPIPB8E9PQR5 432 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 PFDN6O15212 129 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 SYNGR1O43759 233 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 IDH3BO43837 385 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 SERPINA1P01009 418 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 TNNC2P02585 160 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 RLN2P04090 185 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 TYMSP04818 313 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 PGA4P0DJD7 388 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 PGA3P0DJD8 388 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 CT45A10P0DMU9 189 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 PAX1P15863 534 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 GGT1P19440 569 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 MARK3P27448 753 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 HTR1DP28221 377 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 GCKP35557 465 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 IDH3GP51553 393 aaPredicted RBP3.22□□□□□ -1.89
SKP1-209ENST00000522552 PPP1CBP62140 327 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms