RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 BRICD5Q6PL45 260 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 LYPD2Q6UXB3 125 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 PTCHD4Q6ZW05 846 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-204ENST00000521331 SSMEM1Q8WWF3 244 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
PRKDC-204ENST00000521331 TECTBQ96PL2 329 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 CCT8L2Q96SF2 557 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 PCGF1Q9BSM1 259 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 CHIAQ9BZP6 476 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 MMP27Q9H306 513 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 WDR76Q9H967 626 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 KRCC1Q9NPI7 259 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-204ENST00000521331 TNFRSF19Q9NS68 423 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 C1RLQ9NZP8 487 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 PDP1Q9P0J1 537 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-204ENST00000521331 RPS6KA6Q9UK32 745 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 CAPN7Q9Y6W3 813 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 ENPP4Q9Y6X5 453 aa12.38□□□□□ -0.43
PRKDC-204ENST00000521331 ZNF879B4DU55 563 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 TNFRSF13BO14836 293 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-204ENST00000521331 TIMM23O14925 209 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 SLC22A2O15244 555 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 FAM20BO75063 409 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 SERPINA1P01009 418 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 H1F0P07305 194 aaKnown RBP12.37□□□□□ -0.43
PRKDC-204ENST00000521331 MELTFP08582 738 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 ACSM4P0C7M7 580 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 CFHR2P36980 270 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 CDKN2AP42771 156 aaKnown RBP12.37□□□□□ -0.43
PRKDC-204ENST00000521331 RAD23AP54725 363 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 SRSF4Q08170 494 aaKnown RBP12.37□□□□□ -0.43
PRKDC-204ENST00000521331 GK2Q14410 553 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-204ENST00000521331 MEP1BQ16820 701 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-204ENST00000521331 KRTAP27-1Q3LI81 207 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 CLEC12AQ5QGZ9 265 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 ZNF620Q6ZNG0 422 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 SLC15A3Q8IY34 581 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 GATAD2BQ8WXI9 593 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 RCN3Q96D15 328 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 SLC22A4Q9H015 551 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 MMADHCQ9H3L0 296 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-204ENST00000521331 FN3KRPQ9HA64 309 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 TRIM36Q9NQ86 728 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 ERVK-18Q9QC07 812 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 RNF7Q9UBF6 113 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 TMCC3Q9ULS5 477 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 AURKCQ9UQB9 309 aa12.37□□□□□ -0.43
PRKDC-204ENST00000521331 FAM32AQ9Y421 112 aaKnown RBP12.37□□□□□ -0.43
PRKDC-204ENST00000521331 WNK1Q9H4A3 2382 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 IGLV1-36A0A0B4J1U3 117 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 TOX4O94842 621 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 MDH1P40925 334 aaKnown RBP12.36□□□□□ -0.43
PRKDC-204ENST00000521331 OMPP47874 163 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 RELBQ01201 579 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 SLC36A3Q495N2 470 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 FGD3Q5JSP0 725 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 RUSC1-AS1Q66K80 236 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 PGAP1Q75T13 922 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 HDXQ7Z353 690 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 PNLDC1Q8NA58 520 aaKnown RBP12.36□□□□□ -0.43
PRKDC-204ENST00000521331 TBC1D15Q8TC07 691 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 SPRYD4Q8WW59 207 aaPredicted RBP12.36□□□□□ -0.43
PRKDC-204ENST00000521331 DYRK2Q92630 601 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 TSSK2Q96PF2 358 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 PITX2Q99697 317 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 TRIM15Q9C019 465 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 VIPAS39Q9H9C1 493 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 UFSP2Q9NUQ7 469 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 GMPR2Q9P2T1 348 aaKnown RBP12.36□□□□□ -0.43
PRKDC-204ENST00000521331 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
PRKDC-204ENST00000521331 CENPVL3A0A0U1RRI6 287 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 F5H5K5 113 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 LGALS8O00214 317 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 DCTN6O00399 190 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 NDUFA2O43678 99 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 SASH3O75995 380 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 PPP1R3DO95685 299 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 LCATP04180 440 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 SFTPBP07988 381 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 MMP9P14780 707 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 RHCEP18577 417 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 FXYD6P3P58550 94 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 TRAP1Q12931 704 aaKnown RBP12.35□□□□□ -0.43
PRKDC-204ENST00000521331 OR8G1Q15617 311 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 METTL11BQ5VVY1 283 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 PRAMEF6Q5VXH4 476 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 SLC18B1Q6NT16 456 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 SMARCD3Q6STE5 483 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 TSEN54Q7Z6J9 526 aaKnown RBP12.35□□□□□ -0.43
PRKDC-204ENST00000521331 PLPP7Q8NBV4 271 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 C19orf18Q8NEA5 215 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 SLC26A10Q8NG04 563 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 OR2AJ1Q8NGZ0 328 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 RP9Q8TA86 221 aaKnown RBP12.35□□□□□ -0.43
PRKDC-204ENST00000521331 FAM162AQ96A26 154 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 SLCO4A1Q96BD0 722 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms