RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 VSX2P58304 361 aaPredicted RBP2.83□□□□□ -1.96
SQLE-204ENST00000520493 OR2B8PP59922 312 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 VSNL1P62760 191 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 ST3GAL4Q11206 333 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 PON3Q15166 354 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 FRMPD2BQ6IN97 320 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 FAHD1Q6P587 224 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 CD300LGQ6UXG3 332 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 C12orf54Q6X4T0 127 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 RNF165Q6ZSG1 346 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 ABHD12BQ7Z5M8 362 aaPredicted RBP2.83□□□□□ -1.96
SQLE-204ENST00000520493 MRPL55Q7Z7F7 128 aaKnown RBP2.83□□□□□ -1.96
SQLE-204ENST00000520493 SLC34A3Q8N130 599 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 DAW1Q8N136 415 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 WDR31Q8NA23 367 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 MDS2Q8NDY4 140 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 OR7G1Q8NGA0 311 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 OR10W1Q8NGF6 305 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 OR10Z1Q8NGY1 313 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 LINC01006Q8NI28 216 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 OR51E1Q8TCB6 317 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 MARC2Q969Z3 335 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 TSNAXQ99598 290 aaKnown RBP2.83□□□□□ -1.96
SQLE-204ENST00000520493 UTP23Q9BRU9 249 aaKnown RBP2.83□□□□□ -1.96
SQLE-204ENST00000520493 BBS2Q9BXC9 721 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 PARP12Q9H0J9 701 aaKnown RBP2.83□□□□□ -1.96
SQLE-204ENST00000520493 HDHD2Q9H0R4 259 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 REEP1Q9H902 201 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 OR2S2Q9NQN1 319 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 MRM2Q9UI43 246 aaKnown RBP2.83□□□□□ -1.96
SQLE-204ENST00000520493 CES1P1Q9UKY3 287 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 FADS3Q9Y5Q0 445 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 USP42Q9H9J4 1324 aaKnown RBP2.83□□□□□ -1.96
SQLE-204ENST00000520493 WDR62O43379 1518 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 CHD4Q14839 1912 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 A0A0B4J2E0 115 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 A0A1B0GTI1 187 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 FAM166BA8MTA8 275 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 DFFAO00273 331 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 CALUO43852 315 aaPredicted RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 SLC16A7O60669 478 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 GCGP01275 180 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 BGLAPP02818 100 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 GLAP06280 429 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 ZDHHC11BP0C7U3 371 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 PGA4P0DJD7 388 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 PGA3P0DJD8 388 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 PGA5P0DJD9 388 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 HTR1EP28566 365 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 DRD3P35462 400 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 PCK1P35558 622 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 ARL2P36404 184 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 PRLHRP49683 370 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 NUP107P57740 925 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 RPL31P62899 125 aaKnown RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 PRR3P79522 188 aaKnown RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 MAD2L1BPQ15013 274 aaPredicted RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 TAL2Q16559 108 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 NDUFAF6Q330K2 333 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 RFX4Q33E94 735 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 GCSAMLQ5JQS6 135 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 ZNF493Q6ZR52 646 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 TRMT10CQ7L0Y3 403 aaKnown RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 BHLHA15Q7RTS1 189 aaPredicted RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 SSX6Q7RTT6 188 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 SELENOHQ8IZQ5 122 aaKnown RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 FAM9CQ8IZT9 166 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 ARRDC1Q8N5I2 433 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 NPBQ8NG41 125 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 OR51A7Q8NH64 312 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 FAM151AQ8WW52 585 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 GTF2H4Q92759 462 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 CREB3L1Q96BA8 519 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 RPUSD4Q96CM3 377 aaKnown RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 LRRC58Q96CX6 371 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 SGTBQ96EQ0 304 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 ZNF396Q96N95 335 aaPredicted RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 ZIM3Q96PE6 472 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 TIMM29Q9BSF4 260 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 ANGPTL4Q9BY76 406 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 CHRNA10Q9GZZ6 450 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 C1orf198Q9H425 327 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 MS4A12Q9NXJ0 267 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 SLC17A7Q9P2U7 560 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 NXT1Q9UKK6 140 aaKnown RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 CFL2Q9Y281 166 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 ACOT9Q9Y305 439 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 OR51B2Q9Y5P1 312 aa2.82□□□□□ -1.96
SQLE-204ENST00000520493 MRPS18BQ9Y676 258 aaKnown RBP2.82□□□□□ -1.96
SQLE-204ENST00000520493 IGHV3OR16-9A0A0B4J2B5 98 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 RTL8CO15255 209 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 RAD51BO15315 384 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 CDC40O60508 579 aaKnown RBP eCLIP2.81□□□□□ -1.96
SQLE-204ENST00000520493 SUPT7LO94864 414 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 IGLV1-47P01700 117 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 ERGP11308 486 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 CD1EP15812 388 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 CRISP2P16562 243 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 GABRG2P18507 467 aa2.81□□□□□ -1.96
SQLE-204ENST00000520493 MYL9P24844 172 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms