RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 SELEP16581 610 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 TNFRSF1AP19438 455 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 NAA10P41227 235 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-221ENST00000520265 RAD23AP54725 363 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 SLC3A1Q07837 685 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 HNRNPA0Q13151 305 aaKnown RBP12.03□□□□□ -0.48
VEGFA-221ENST00000520265 SNAPC1Q16533 368 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 GFOD2Q3B7J2 385 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 PGAP1Q75T13 922 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 AMIGO2Q86SJ2 522 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 NAA40Q86UY6 237 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 HIPK1Q86Z02 1210 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 DDOQ99489 341 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 PRRG3Q9BZD7 231 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
VEGFA-221ENST00000520265 DNAJC27Q9NZQ0 273 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 WIPI2Q9Y4P8 454 aa12.03□□□□□ -0.48
VEGFA-221ENST00000520265 SONP18583 2426 aaKnown RBP12.02□□□□□ -0.48
VEGFA-221ENST00000520265 GGT3PA6NGU5 568 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 GLCEO94923 617 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 IFNA2P01563 188 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 FCGR1AP12314 374 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 IGFBP5P24593 272 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 SRP14P37108 136 aaKnown RBP12.02□□□□□ -0.49
VEGFA-221ENST00000520265 SLC15A1P46059 708 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 CX3CR1P49238 355 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 CDK5R2Q13319 367 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 ATP6AP1Q15904 470 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 SPRNQ5BIV9 151 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 FBXW12Q6X9E4 464 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 Q6ZR03 302 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 CXXC5Q7LFL8 322 aaKnown RBP12.02□□□□□ -0.49
VEGFA-221ENST00000520265 DPY19L4Q7Z388 723 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 GLCCI1Q86VQ1 547 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-221ENST00000520265 ZDHHC13Q8IUH4 622 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 CPOQ8IVL8 374 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 OR8G5Q8NG78 346 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 OR10S1Q8NGN2 331 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 OR13G1Q8NGZ3 307 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 OR2AE1Q8NHA4 323 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 THEM6Q8WUY1 208 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 DNAJC9Q8WXX5 260 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 LRTOMTQ8WZ04 291 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 RAB39BQ96DA2 213 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 NRBF2Q96F24 287 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 OR2V2Q96R30 315 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 NMNAT2Q9BZQ4 307 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 SEMA6AQ9H2E6 1030 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 BRD7Q9NPI1 651 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 LPAR3Q9UBY5 353 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 PPP1R3CQ9UQK1 317 aa12.02□□□□□ -0.49
VEGFA-221ENST00000520265 SAC3D1A6NKF1 404 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 SELENOFO60613 162 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 H2BFMP0C1H6 154 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 SBK2P0C263 348 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 SRD5A1P18405 259 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 RBMXP38159 391 aaKnown RBP12.01□□□□□ -0.49
VEGFA-221ENST00000520265 CRISP1P54107 249 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 GRB2P62993 217 aaKnown RBP12.01□□□□□ -0.49
VEGFA-221ENST00000520265 GK2Q14410 553 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-221ENST00000520265 CR1LQ2VPA4 569 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 FAM120AOSQ5T036 256 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 DRAM2Q6UX65 266 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 SHFQ7M4L6 423 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 PRIMA1Q86XR5 153 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 BBS1Q8NFJ9 593 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 OR51F2Q8NH61 342 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 UTP4Q969X6 686 aaKnown RBP12.01□□□□□ -0.49
VEGFA-221ENST00000520265 KCNJ15Q99712 375 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 ZNF665Q9H7R5 613 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 NTN4Q9HB63 628 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 DDX28Q9NUL7 540 aaKnown RBP12.01□□□□□ -0.49
VEGFA-221ENST00000520265 TMEM106BQ9NUM4 274 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 TMEM100Q9NV29 134 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 PCDHB10Q9UN67 800 aa12.01□□□□□ -0.49
VEGFA-221ENST00000520265 NAV3Q8IVL0 2385 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 YLPM1P49750 1951 aaKnown RBP12□□□□□ -0.49
VEGFA-221ENST00000520265 IQCF6A8MYZ5 107 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 B4DSR2 109 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 FAM157AC9JC47 383 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 F5H5P2 479 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 H0YL77 283 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 M0R129 80 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 MITFO75030 526 aaPredicted RBP12□□□□□ -0.49
VEGFA-221ENST00000520265 HLA-DPB1P04440 258 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 CD55P08174 381 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 MRPL3P09001 348 aaKnown RBP12□□□□□ -0.49
VEGFA-221ENST00000520265 PCMT1P22061 227 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 SRP9P49458 86 aaKnown RBP12□□□□□ -0.49
VEGFA-221ENST00000520265 DAPP51397 102 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 CDK5Q00535 292 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 APOFQ13790 326 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 OR8G1Q15617 311 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 TIGD6Q17RP2 521 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 RSPO1Q2MKA7 263 aaPredicted RBP12□□□□□ -0.49
VEGFA-221ENST00000520265 GLYATL3Q5SZD4 288 aa12□□□□□ -0.49
VEGFA-221ENST00000520265 LINC01590Q5TEZ4 76 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms