RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 INTS14Q96SY0 518 aa16.33■□□□□ 0.2
SDC2-202ENST00000518385 METTL7AQ9H8H3 244 aa16.33■□□□□ 0.2
SDC2-202ENST00000518385 CKLFQ9UBR5 152 aa16.33■□□□□ 0.2
SDC2-202ENST00000518385 GPR160Q9UJ42 338 aa16.33■□□□□ 0.2
SDC2-202ENST00000518385 PURGQ9UJV8 347 aaKnown RBP16.33■□□□□ 0.2
SDC2-202ENST00000518385 ZNF346Q9UL40 294 aaKnown RBP16.33■□□□□ 0.2
SDC2-202ENST00000518385 OR14I1A6ND48 311 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 NPIPB13A6NJU9 1138 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 DISC1C4P0D8 188 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 NPIPB4C9JG80 1138 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 DNASE2O00115 360 aaPredicted RBP16.32■□□□□ 0.2
SDC2-202ENST00000518385 EIF1AYO14602 144 aaKnown RBP16.32■□□□□ 0.2
SDC2-202ENST00000518385 XKRYO14609 159 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 RAB3DO95716 219 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 F13BP05160 661 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 CD2P06729 351 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 HOXB1P14653 301 aaPredicted RBP16.32■□□□□ 0.2
SDC2-202ENST00000518385 TCN2P20062 427 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 CNR1P21554 472 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 EIF1AXP47813 144 aaKnown RBP16.32■□□□□ 0.2
SDC2-202ENST00000518385 POU3F4P49335 361 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 ZNF41P51814 821 aaPredicted RBP16.32■□□□□ 0.2
SDC2-202ENST00000518385 SORDQ00796 357 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 RAB12Q6IQ22 244 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 ACOT7LQ6ZUV0 252 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 NDUFAF7Q7L592 441 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 ZDHHC22Q8N966 263 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 ZNF248Q8NDW4 579 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 OR10K1Q8NGX5 313 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 CT55Q8WUE5 264 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 ZNRF4Q8WWF5 429 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 FBXW5Q969U6 566 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 FOXRED1Q96CU9 486 aaPredicted RBP16.32■□□□□ 0.2
SDC2-202ENST00000518385 PRRT1Q99946 306 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 TXNIPQ9H3M7 391 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 IKZF2Q9UKS7 526 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 TNFSF18Q9UNG2 199 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 WIF1Q9Y5W5 379 aa16.32■□□□□ 0.2
SDC2-202ENST00000518385 ZNF292O60281 2723 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 TRAV18A0A075B6X5 111 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 GMFGO60234 142 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 DOK2O60496 412 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 COX6A1P12074 109 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 RAB6AP20340 208 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 GRPRP30550 384 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 RPL27P61353 136 aaKnown RBP16.31■□□□□ 0.2
SDC2-202ENST00000518385 CTAG1AP78358 180 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 POMZP3Q6PJE2 187 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 ARMC10Q8N2F6 343 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 SERINC1Q9NRX5 453 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 FBXL2Q9UKC9 423 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 FARSAQ9Y285 508 aaKnown RBP16.31■□□□□ 0.2
SDC2-202ENST00000518385 MPDZO75970 2070 aa16.31■□□□□ 0.2
SDC2-202ENST00000518385 FTCDNL1E5RQL4 147 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 PLPP3O14495 311 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 RPP14O95059 124 aaKnown RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 ICAM2P13598 275 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 TBPP20226 339 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 PTGDSP41222 190 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 SOX2P48431 317 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 NOVA1P51513 510 aaKnown RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 RPS15P62841 145 aaKnown RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 MESTQ5EB52 335 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 PDSS1Q5T2R2 415 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 C1QL3Q5VWW1 255 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 C11orf87Q6NUJ2 197 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 FAAP20Q6NZ36 180 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 LRFN4Q6PJG9 635 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 LINC00518Q8N0U6 118 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 OTOSQ8NHW6 89 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 SLC25A36Q96CQ1 311 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 OR8B4Q96RC9 309 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 NUDT16L1Q9BRJ7 211 aaKnown RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 NKX6-2Q9C056 277 aaPredicted RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 FAM117AQ9C073 453 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 BARX1Q9HBU1 254 aaPredicted RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 TAS2R3Q9NYW6 316 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 HS3ST3B1Q9Y662 390 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 SDK2Q58EX2 2172 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 TRAV8-7A0A075B6U6 113 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 TRAV14DV4A0A0A6YYC5 116 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 TMEM272A0A1B0GTI8 110 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 A6NIZ1 184 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 C17orf51A8MQB3 221 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 PRR32B1ATL7 298 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 APOC3P02656 99 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 MAS1P04201 325 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 ADH6P28332 368 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 EIF1P41567 113 aaKnown RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 RAP1BP61224 184 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 RAP1AP62834 184 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 S100A12P80511 92 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 NAAAQ02083 359 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 ROM1Q03395 351 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 C2orf76Q3KRA6 126 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 PAN3Q58A45 887 aaKnown RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 TEX30Q5JUR7 227 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 KCTD18Q6PI47 426 aaPredicted RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 ZNF511Q8NB15 262 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms