RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 KLK1P06870 262 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 KRT16P08779 473 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 TACSTD2P09758 323 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 ACSM4P0C7M7 580 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 SMIM10L2AP0DMW4 78 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 SMIM10L2BP0DMW5 78 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 CALM1P0DP23 149 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 CALM2P0DP24 149 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 CALM3P0DP25 149 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 PGAM2P15259 253 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 KLK2P20151 261 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 ZP3P21754 424 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 LCN1P31025 176 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 RGRP47804 291 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 KLK7P49862 253 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 DEFB103AP81534 67 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 ECH1Q13011 328 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 GPNMBQ14956 572 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 PSMD5Q16401 504 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 C18orf21Q32NC0 220 aaPredicted RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 CCDC122Q5T0U0 273 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 PRMT9Q6P2P2 845 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 C6orf89Q6UWU4 347 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 UNQ9370/PRO34162Q6UXP9 181 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 TFAP2EQ6VUC0 442 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 PRSS41Q7RTY9 318 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 ZNF571Q7Z3V5 609 aaPredicted RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 PUSL1Q8N0Z8 303 aaKnown RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 TRAM1L1Q8N609 369 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 ZNF525Q8N782 197 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 Q8N7P7 452 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 OR51S1Q8NGJ8 323 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 APH1AQ96BI3 265 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 B3GALT6Q96L58 329 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 NOL4LQ96MY1 436 aaPredicted RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 TAAR1Q96RJ0 339 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 RIOK2Q9BVS4 552 aaKnown RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 C19orf24Q9BVV8 132 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 C20orf85Q9H1P6 137 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 OR51J1Q9H342 316 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 MFSD1Q9H3U5 465 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 KIR3DX1Q9H7L2 352 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 PATZ1Q9HBE1 687 aaKnown RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 RETNQ9HD89 108 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 VNN3Q9NY84 501 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 TREM2Q9NZC2 230 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 YARS2Q9Y2Z4 477 aaKnown RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 RBMX2Q9Y388 322 aaKnown RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 FLVCR1Q9Y5Y0 555 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 RLFQ13129 1914 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 ECM29Q5VYK3 1845 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 ZNF236Q9UL36 1845 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 DDX60LQ5H9U9 1706 aaKnown RBP2.28□□□□□ -2.04
HERC4-215ENST00000515753 A0A0B4J2A0 478 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 A0A0G2JRQ6 117 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 RAB19A4D1S5 217 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 PRSS37A4D1T9 235 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 EPOPA6NHQ4 379 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 GMDSO60547 372 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 SLC19A2O60779 497 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 SNAPINO95295 136 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 SMC2O95347 1197 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 LSM8O95777 96 aaKnown RBP2.28□□□□□ -2.04
HERC4-215ENST00000515753 SEMG1P04279 462 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 GFAPP14136 432 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 ATP6V1B2P21281 511 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 BGNP21810 368 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 CXCR2P25025 360 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 IVDP26440 423 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 AK4P27144 223 aaPredicted RBP2.28□□□□□ -2.04
HERC4-215ENST00000515753 OR1E1P30953 314 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 IL2RGP31785 369 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 SLC26A3P40879 764 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 NBL1P41271 181 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 GPR6P46095 362 aaPredicted RBP2.28□□□□□ -2.04
HERC4-215ENST00000515753 SUB1P53999 127 aaKnown RBP eCLIP2.28□□□□□ -2.04
HERC4-215ENST00000515753 UCNP55089 124 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 CLDN6P56747 220 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 SNAP25P60880 206 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 UBE2MP61081 183 aaKnown RBP2.28□□□□□ -2.04
HERC4-215ENST00000515753 RPS15AP62244 130 aaKnown RBP2.28□□□□□ -2.04
HERC4-215ENST00000515753 SP4Q02446 784 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 ZNF92Q03936 586 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 BCL2L1Q07817 233 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 ASAH1Q13510 395 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 ATP6AP1Q15904 470 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 NRF1Q16656 503 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 TRMT5Q32P41 509 aaKnown RBP2.28□□□□□ -2.04
HERC4-215ENST00000515753 PTPN20Q4JDL3 420 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 PAN3Q58A45 887 aaKnown RBP2.28□□□□□ -2.04
HERC4-215ENST00000515753 C6orf183Q5T699 404 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 MARC1Q5VT66 337 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 C1orf146Q5VVC0 180 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 C1orf94Q6P1W5 598 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 LINC00336Q6ZUF6 198 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 OR2W3Q7Z3T1 314 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 CD302Q8IX05 232 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 PRR22Q8IZ63 422 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 C17orf78Q8N4C9 275 aa2.28□□□□□ -2.04
HERC4-215ENST00000515753 PRELID2Q8N945 189 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms