RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ANXA2P07355 339 aaKnown RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 PTAFRP25105 342 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 PCSK6P29122 969 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 CALCRP30988 508 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 WNT5AP41221 380 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 KIR2DL3P43628 341 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 SLC6A9P48067 706 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 RGS6P49758 472 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 CCR9P51686 369 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 NANOS3P60323 173 aaKnown RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 MLLT11Q13015 90 aaPredicted RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 ALKBH1Q13686 389 aaKnown RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 CDK5R1Q15078 307 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 NEDD8Q15843 81 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 TIGD6Q17RP2 521 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 NCMAPQ5T1S8 102 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 SYT6Q5T7P8 510 aaPredicted RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 CATSPERDQ86XM0 798 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 PRSS35Q8N3Z0 413 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 MUL1Q969V5 352 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 C4orf45Q96LM5 186 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 OPALINQ96PE5 141 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 MOB1AQ9H8S9 216 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 SP140LQ9H930 580 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 BRD7Q9NPI1 651 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 TBCCD1Q9NVR7 557 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 FRRS1LQ9P0K9 344 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 EIF3KQ9UBQ5 218 aaKnown RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 NUFIP1Q9UHK0 495 aaKnown RBP10.84□□□□□ -0.67
PDPN-210ENST00000513143 SCOCQ9UIL1 159 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 OR52A1Q9UKL2 312 aa10.84□□□□□ -0.67
PDPN-210ENST00000513143 J3QW42 95 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 CASKO14936 926 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 PLPP2O43688 288 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 CRYAAP02489 173 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 TTRP02766 147 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 LCATP04180 440 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 TFAP2AP05549 437 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 CD1AP06126 327 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 HSMCR30P0CW71 290 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 SLC2A1P11166 492 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 ANOS1P23352 680 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 KIR3DL2P43630 455 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 NR1H2P55055 460 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 GP2P55259 537 aaKnown RBP10.83□□□□□ -0.68
PDPN-210ENST00000513143 GPR50Q13585 617 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 TPBGQ13641 420 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 SNAI3Q3KNW1 292 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 WDR38Q5JTN6 314 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 DMKNQ6E0U4 476 aaPredicted RBP10.83□□□□□ -0.68
PDPN-210ENST00000513143 ZNF544Q6NX49 715 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 ARL9Q6T311 187 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 FAM57BQ71RH2 274 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 ELMOD2Q8IZ81 293 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 ZFP41Q8N8Y5 198 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 OR52H1Q8NGJ2 320 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 FAM222BQ8WU58 562 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 PPP1R14AQ96A00 147 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 APOBEC3DQ96AK3 386 aaPredicted RBP10.83□□□□□ -0.68
PDPN-210ENST00000513143 SMIM19Q96E16 107 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 PGAM5Q96HS1 289 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 PBOV1Q9GZY1 135 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 ESRP2Q9H6T0 727 aaKnown RBP10.83□□□□□ -0.68
PDPN-210ENST00000513143 ZNF319Q9P2F9 582 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 SLC22A13Q9Y226 551 aa10.83□□□□□ -0.68
PDPN-210ENST00000513143 LRRK2Q5S007 2527 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 TRBV2A0A0J9YWF9 115 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.82□□□□□ -0.68
PDPN-210ENST00000513143 C5orf63A6NC05 138 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 OR4C45A6NMZ5 311 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 PRSS44E7EML9 344 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 SMPD2O60906 423 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 NGFP01138 241 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 CPEP16870 476 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 CELP19835 753 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 PSMB9P28065 219 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 ALDH3B2P48448 385 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 UCP2P55851 309 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 BSPH1Q075Z2 132 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 BEX5Q5H9J7 111 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 ARMCX4Q5H9R4 360 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 BCL2L15Q5TBC7 163 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 UNQ6126/PRO20091Q6UXV3 157 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 ZNF101Q8IZC7 436 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 OR8B12Q8NGG6 310 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 PLPPR2Q96GM1 343 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 SPOCK3Q9BQ16 436 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 KCNS3Q9BQ31 491 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 OR10A2Q9H208 303 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 SLC24A3Q9HC58 644 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 GTF2A1LQ9UNN4 478 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 N6AMT1Q9Y5N5 214 aa10.82□□□□□ -0.68
PDPN-210ENST00000513143 HELZ2Q9BYK8 2649 aaKnown RBP10.82□□□□□ -0.68
PDPN-210ENST00000513143 SPTAN1Q13813 2472 aaKnown RBP10.81□□□□□ -0.68
PDPN-210ENST00000513143 COL12A1Q99715 3063 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 A0A0U1RQV5 110 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 TMEM212A6NML5 194 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 DEFB108AA8MXU0 73 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms