RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 FAM71F1Q96KD3 344 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-216ENST00000512683 NSMCE2Q96MF7 247 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 TSSK2Q96PF2 358 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 TMEM246Q9BRR3 403 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 C1QTNF5Q9BXJ0 243 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 RERGLQ9H628 205 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 BEX1Q9HBH7 125 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 IL1RAPQ9NPH3 570 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 TRIM36Q9NQ86 728 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 KIF17Q9P2E2 1029 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 TRRAPQ9Y4A5 3859 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 PPP1R3DO95685 299 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 GPANK1O95872 356 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 CRYBA1P05813 215 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 GSSP48637 474 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 PITPNBP48739 271 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 SMIM11AP58511 58 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 SPIBQ01892 262 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 COX10Q12887 443 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 HNRNPA0Q13151 305 aaKnown RBP10.5□□□□□ -0.73
VEGFA-216ENST00000512683 RFX4Q33E94 735 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 KRTAP27-1Q3LI81 207 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 SLC36A3Q495N2 470 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 GPR157Q5UAW9 335 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 C1orf94Q6P1W5 598 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 DEFB107AQ8IZN7 70 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 OR11L1Q8NGX0 322 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 ERMAPQ96PL5 475 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-216ENST00000512683 NUDT16L1Q9BRJ7 211 aaKnown RBP10.5□□□□□ -0.73
VEGFA-216ENST00000512683 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 CLN8Q9UBY8 286 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 LHFPL6Q9Y693 200 aa10.5□□□□□ -0.73
VEGFA-216ENST00000512683 PKD1L1Q8TDX9 2849 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 IGLV1-36A0A0B4J1U3 117 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 SRRM5B3KS81 715 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 P2RY10O00398 339 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 ARPC3O15145 178 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 RER1O15258 196 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 ENSAO43768 121 aaKnown RBP10.49□□□□□ -0.73
VEGFA-216ENST00000512683 DCTN3O75935 186 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 NDUFA7O95182 113 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 FABP3P05413 133 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 DBHP09172 617 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 IGHV4-38-2P0DP08 117 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 FPR3P25089 353 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 RRM2P31350 389 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 RBMXP38159 391 aaKnown RBP10.49□□□□□ -0.73
VEGFA-216ENST00000512683 PSMB10P40306 273 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 CD200P41217 278 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 MALLQ13021 153 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 MEP1BQ16820 701 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 RSPO1Q2MKA7 263 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-216ENST00000512683 SPATS1Q496A3 300 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 WDR25Q64LD2 544 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-216ENST00000512683 Q6YL49 198 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 OR5AS1Q8N127 324 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 OR6V1Q8N148 313 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 FITM2Q8N6M3 262 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 SPERTQ8NA61 448 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 OR10S1Q8NGN2 331 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 FANK1Q8TC84 345 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 DMRTB1Q96MA1 342 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 DUX5Q96PT3 197 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 B9D1Q9UPM9 204 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 POMT1Q9Y6A1 747 aa10.49□□□□□ -0.73
VEGFA-216ENST00000512683 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-216ENST00000512683 IDH3BO43837 385 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 OR10H3O60404 316 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 PTBP3O95758 552 aaKnown RBP10.48□□□□□ -0.73
VEGFA-216ENST00000512683 CYB5R3P00387 301 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-216ENST00000512683 KNG1P01042 644 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 HIST1H1CP16403 213 aaKnown RBP10.48□□□□□ -0.73
VEGFA-216ENST00000512683 SLC6A6P31641 620 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 HMGA2P52926 109 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 HLXQ14774 488 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-216ENST00000512683 PDCD1Q15116 288 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 PGBD2Q6P3X8 592 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 C16orf89Q6UX73 402 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 ZNF841Q6ZN19 808 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 ZBTB46Q86UZ6 589 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 MOGAT3Q86VF5 341 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 ZDHHC21Q8IVQ6 265 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 SLC26A10Q8NG04 563 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 ZNF420Q8TAQ5 688 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-216ENST00000512683 MCUR1Q96AQ8 359 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 NMNAT3Q96T66 252 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 CDADC1Q9BWV3 514 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 SRA1Q9HD15 236 aaKnown RBP10.48□□□□□ -0.73
VEGFA-216ENST00000512683 PTTG3PQ9NZH4 202 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 ERVK-18Q9QC07 812 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 KCNG2Q9UJ96 466 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 POLR1DQ9Y2S0 133 aa10.48□□□□□ -0.73
VEGFA-216ENST00000512683 OR6C68A6NDL8 312 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 F5H5P2 479 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 MLNRO43193 412 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 HOXA3O43365 443 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-216ENST00000512683 GMDSO60547 372 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 ECDO95905 644 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms