RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 NPAS3Q8IXF0 933 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 STX19Q8N4C7 294 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 DNAJC22Q8N4W6 341 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 TMEM161BQ8NDZ6 487 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 RDH11Q8TC12 318 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 ABHD3Q8WU67 409 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 VAT1Q99536 393 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 GABRG3Q99928 467 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 COMMD4Q9H0A8 199 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 DHX35Q9H5Z1 703 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 MYH6P13533 1939 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 TRGV11A0A075B6L2 103 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 TCRBV5S1A1TA0A578 114 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 NDUFB4O95168 129 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 ESDP10768 282 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 TTPAP49638 278 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 MEOX2P50222 304 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 LIM2P55344 173 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 ID2Q02363 134 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 FNDC7Q5VTL7 733 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 XKRXQ6PP77 449 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZNF782Q6ZMW2 699 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 PRSS48Q7RTY5 328 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 PRSS35Q8N3Z0 413 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 OR2T12Q8NG77 320 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 MRPS31Q92665 395 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 SFRP2Q96HF1 295 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 MS4A4EQ96PG1 132 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 THAP7Q9BT49 309 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 MAP1LC3AQ9H492 121 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 MIEF1Q9NQG6 463 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 HHLA2Q9UM44 414 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 CHST2Q9Y4C5 530 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 A0A1B0GU03 582 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 A0A1W2PR80 420 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 EVPLLA8MZ36 301 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZNF878C9JN71 531 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 H0YIZ8 118 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 CDIPTO14735 213 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 CLDN11O75508 207 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 RFPL2O75678 378 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 KRT75O95678 551 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 HLA-AP01891 365 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 SERPINA2P20848 420 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 SNRPNP63162 240 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 DGCR2P98153 550 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 MAPK14Q16539 360 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 ASPRV1Q53RT3 343 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 OGFRL1Q5TC84 451 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 LEG1Q6P5S2 330 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 ADAMTSL5Q6ZMM2 481 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 SHFQ7M4L6 423 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 SFTPA1Q8IWL2 248 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 PGBD5Q8N414 524 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 OR5AR1Q8NGP9 310 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 OR14A16Q8NHC5 309 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 TMEM234Q8WY98 164 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 GNRHR2Q96P88 292 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 ALKBH3Q96Q83 286 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 KXD1Q9BQD3 176 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 ALOXE3Q9BYJ1 711 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 RRAGCQ9HB90 399 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 TIGARQ9NQ88 270 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 TREM2Q9NZC2 230 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 DICER1Q9UPY3 1922 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 ANKRD20A5PA0PJZ0 165 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 PHYHO14832 338 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 OIP5O43482 229 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 RAD51CO43502 376 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 IGSF6O95976 241 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 HILS1P60008 231 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 TFAMQ00059 246 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 PTGES3Q15185 160 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 TMEM65Q6PI78 240 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 C12orf54Q6X4T0 127 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 NAPRTQ6XQN6 538 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 OLIG3Q7RTU3 272 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 LINC00301Q8NCQ3 95 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZNF502Q8TBZ5 544 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 CRYGNQ8WXF5 182 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 CLDN23Q96B33 292 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 SIGLEC10Q96LC7 697 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 C2orf88Q9BSF0 95 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 URM1Q9BTM9 101 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 TMED9Q9BVK6 235 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 MIXL1Q9H2W2 232 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 THYN1Q9P016 225 aa5.37□□□□□ -1.55
TRAPPC11-209ENST00000512476 SBF1O95248 1867 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 IGLV3-22A0A075B6J6 115 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 ALOX12BO75342 701 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 KLF8O95600 359 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 GSTA1P08263 222 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 C8orf88P0DMB2 117 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 IFI30P13284 250 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 GTF2F2P13984 249 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 CEACAM8P31997 349 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 REG1BP48304 166 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 DCDC1P59894 354 aa5.36□□□□□ -1.55
TRAPPC11-209ENST00000512476 DEFA6Q01524 100 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms