RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ERCC1P07992 297 aaPredicted RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PRB4P10163 310 aaPredicted RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 IGLL1P15814 213 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PGCP20142 388 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PSMB1P20618 241 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PEBP1P30086 187 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 RFX3P48380 749 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 CD151P48509 253 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 CDK9P50750 372 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 RPL26P61254 145 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 SNRPD2P62316 118 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 TNFRSF17Q02223 184 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PAX2Q02962 417 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 SRYQ05066 204 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 ENPEPQ07075 957 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 HERPUD1Q15011 391 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 NDUFA9Q16795 377 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 TIMM50Q3ZCQ8 353 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC36A3Q495N2 470 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 LDLRAP1Q5SW96 308 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 OPN5Q6U736 354 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF562Q6V9R5 426 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 LRRC70Q7Z2Q7 622 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 CCDC36Q8IYA8 594 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PIANPQ8IYJ0 282 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 CENPLQ8N0S6 344 aaPredicted RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 CENPSQ8N2Z9 138 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 ZCCHC7Q8N3Z6 543 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 CSNK1A1LQ8N752 337 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 APCDD1LQ8NCL9 501 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 GPR26Q8NDV2 337 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PLPP5Q8NEB5 264 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 SDR9C7Q8NEX9 313 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 B3GNT7Q8NFL0 401 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 OR52B4Q8NGK2 314 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 OR51Q1Q8NH59 317 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 LINC01006Q8NI28 216 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 TSLPQ969D9 159 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 S100PBPQ96BU1 408 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 CCT7Q99832 543 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 GORASP2Q9H8Y8 452 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 DMAC2Q9NW81 257 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 KLRF1Q9NZS2 232 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 P2RX2Q9UBL9 471 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 GHRLQ9UBU3 117 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PRODH2Q9UF12 536 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 ATP6V1HQ9UI12 483 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 PTBP2Q9UKA9 531 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 RPL26L1Q9UNX3 145 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 MAB21L2Q9Y586 359 aa2.6□□□□□ -1.99
TOPBP1-208ENST00000511439 TRBV7-9A0A0J9YWB2 115 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 CTAGE15A4D2H0 777 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 RNF222A6NCQ9 220 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 DPRXA6NFQ7 191 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 FBLL1A6NHQ2 334 aaKnown RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 E7EQL1 145 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 H0Y8G0 127 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 TXNDC9O14530 226 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 STX10O60499 249 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 NSA2O95478 260 aaKnown RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 EPB41P11171 864 aaKnown RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 IL32P24001 234 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 ARHGDIBP52566 201 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 ATP5IP56385 69 aaPredicted RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 MAXP61244 160 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 EGFEM1PQ0D2K5 195 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC10A7Q0GE19 358 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 IL24Q13007 206 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 TMED1Q13445 227 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 FAM53BQ14153 422 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 EIF2B1Q14232 305 aaKnown RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 TSC22D1Q15714 1073 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 BCL7AQ4VC05 210 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF311Q5JNZ3 666 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 BEND6Q5SZJ8 279 aaPredicted RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 UTF1Q5T230 341 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 PRAMEF20Q5VT98 475 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC22A10Q63ZE4 541 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 DMKNQ6E0U4 476 aaPredicted RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 HACD2Q6Y1H2 254 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 TAS2R42Q7RTR8 314 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 SSX8Q7RTT4 187 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 PRSS41Q7RTY9 318 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 CTAGE6Q86UF2 777 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 FADS6Q8N9I5 356 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 EIF1ADQ8N9N8 165 aaKnown RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF740Q8NDX6 193 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 KLHL30-AS1Q8NEE0 82 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 NFAM1Q8NET5 270 aaPredicted RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 CLDND2Q8NHS1 167 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 RFESDQ8TAC1 157 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 TFB1MQ8WVM0 346 aaKnown RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 TFGQ92734 400 aaPredicted RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 RERGQ96A58 199 aaPredicted RBP2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 C18orf15Q96N68 181 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 ZBTB18Q99592 522 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 DOHHQ9BU89 302 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 POTEKPQ9BYX7 375 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 WDR76Q9H967 626 aa2.59□□□□□ -1.99
TOPBP1-208ENST00000511439 TIGARQ9NQ88 270 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms