RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ZNF878C9JN71 531 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 J3QW42 95 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 WNT9BO14905 357 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 PRODHO43272 600 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 TLX2O43763 284 aaPredicted RBP11.87□□□□□ -0.51
DDX41-212ENST00000511040 CD5LO43866 347 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 RP2O75695 350 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 ACHEP22303 614 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 IL2RGP31785 369 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 LIPAP38571 399 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 GPR6P46095 362 aaPredicted RBP11.87□□□□□ -0.51
DDX41-212ENST00000511040 HCCSP53701 268 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 RIPPLY3P57055 190 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 TNFAIP6P98066 277 aaPredicted RBP11.87□□□□□ -0.51
DDX41-212ENST00000511040 CDK5R2Q13319 367 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 ZMAT1Q5H9K5 638 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 AVPI1Q5T686 147 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 SLX4IPQ5VYV7 408 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 ZFP1Q6P2D0 407 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 ZNF283Q8N7M2 679 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 TCEANCQ8N8B7 351 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 ELMOD3Q96FG2 381 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 IL4I1Q96RQ9 567 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 KCNJ15Q99712 375 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 ZDHHC8Q9ULC8 765 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 TLN2Q9Y4G6 2542 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 MRPL3P09001 348 aaKnown RBP11.86□□□□□ -0.51
DDX41-212ENST00000511040 ZNF16P17020 682 aaPredicted RBP11.86□□□□□ -0.51
DDX41-212ENST00000511040 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
DDX41-212ENST00000511040 CX3CR1P49238 355 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 CHN2P52757 468 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 MRPS11P82912 194 aaKnown RBP11.86□□□□□ -0.51
DDX41-212ENST00000511040 PPP2R2BQ00005 443 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 MVKQ03426 396 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 MALLQ13021 153 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 GK2Q14410 553 aaPredicted RBP11.86□□□□□ -0.51
DDX41-212ENST00000511040 FAM209AQ5JX71 171 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 SLC35D3Q5M8T2 416 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 GLYATL3Q5SZD4 288 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 C12orf73Q69YU5 71 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 CYB5R2Q6BCY4 276 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 SHFQ7M4L6 423 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 MRPL21Q7Z2W9 205 aaKnown RBP11.86□□□□□ -0.51
DDX41-212ENST00000511040 OR2AE1Q8NHA4 323 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 THEM6Q8WUY1 208 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 CCL17Q92583 94 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 SOX7Q9BT81 388 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 OSBPL10Q9BXB5 764 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 EGLN1Q9GZT9 426 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 S100A14Q9HCY8 104 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 DNAJC27Q9NZQ0 273 aa11.86□□□□□ -0.51
DDX41-212ENST00000511040 CGGBP1Q9UFW8 167 aaPredicted RBP11.86□□□□□ -0.51
DDX41-212ENST00000511040 IGHV3-64DA0A0J9YX35 117 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 H0YL77 283 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 EI24O14681 340 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 TBX1O43435 398 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 ANXA2P07355 339 aaKnown RBP11.85□□□□□ -0.51
DDX41-212ENST00000511040 ADH4P08319 380 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 TACSTD2P09758 323 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 HSD11B1P28845 292 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 OTX1P32242 354 aaPredicted RBP11.85□□□□□ -0.51
DDX41-212ENST00000511040 CRYBB2P43320 205 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 GRB2P62993 217 aaKnown RBP11.85□□□□□ -0.51
DDX41-212ENST00000511040 ZNF92Q03936 586 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 ZSCAN26Q16670 478 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 DRAM2Q6UX65 266 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 ZNF771Q7L3S4 317 aaPredicted RBP11.85□□□□□ -0.51
DDX41-212ENST00000511040 OR8G5Q8NG78 346 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 OR10AD1Q8NGE0 317 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 OTOSQ8NHW6 89 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 RNF133Q8WVZ7 376 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 ITLN1Q8WWA0 313 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 ZNF582Q96NG8 517 aaPredicted RBP11.85□□□□□ -0.51
DDX41-212ENST00000511040 TEAD3Q99594 435 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 RBM4BQ9BQ04 359 aaKnown RBP11.85□□□□□ -0.51
DDX41-212ENST00000511040 GABARAPL3Q9BY60 117 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 PRRG3Q9BZD7 231 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 BRD7Q9NPI1 651 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
DDX41-212ENST00000511040 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
DDX41-212ENST00000511040 IQCF6A8MYZ5 107 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 HLA-DPB1P04440 258 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 LYNP07948 512 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 CD55P08174 381 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 H2BFMP0C1H6 154 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 TNFSF4P23510 183 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 OPRL1P41146 370 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 SLC15A1P46059 708 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 GZMKP49863 264 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 TMEM33P57088 247 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 ZNF121P58317 390 aaPredicted RBP11.84□□□□□ -0.51
DDX41-212ENST00000511040 HFEQ30201 348 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 ZIK1Q3SY52 487 aaPredicted RBP11.84□□□□□ -0.51
DDX41-212ENST00000511040 C6orf52Q5T4I8 152 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 LCN1P1Q5VSP4 162 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 FAM57BQ71RH2 274 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 PGAP1Q75T13 922 aa11.84□□□□□ -0.51
DDX41-212ENST00000511040 SLC16A9Q7RTY1 509 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms