RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 DDOQ99489 341 aa15.78■□□□□ 0.12
UBE3D-207ENST00000509102 NIPSNAP1Q9BPW8 284 aa15.78■□□□□ 0.12
UBE3D-207ENST00000509102 COPS4Q9BT78 406 aa15.78■□□□□ 0.12
UBE3D-207ENST00000509102 RBM4Q9BWF3 364 aaKnown RBP15.78■□□□□ 0.12
UBE3D-207ENST00000509102 CMC2Q9NRP2 79 aa15.78■□□□□ 0.12
UBE3D-207ENST00000509102 TMEM100Q9NV29 134 aa15.78■□□□□ 0.12
UBE3D-207ENST00000509102 PDP1Q9P0J1 537 aaPredicted RBP15.78■□□□□ 0.12
UBE3D-207ENST00000509102 COMMD3-BMI1R4GMX3 469 aa15.78■□□□□ 0.12
UBE3D-207ENST00000509102 FBN1P35555 2871 aaKnown RBP15.77■□□□□ 0.12
UBE3D-207ENST00000509102 SBK2P0C263 348 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 SPI1P17947 270 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 ERFP50548 548 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 RAD23AP54725 363 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 KRTAP27-1Q3LI81 207 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 ZNF362Q5T0B9 420 aaPredicted RBP15.77■□□□□ 0.12
UBE3D-207ENST00000509102 DCXRQ7Z4W1 244 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 RFLNBQ8N5W9 214 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 ZNF283Q8N7M2 679 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 OR10AD1Q8NGE0 317 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 SPRYD4Q8WW59 207 aaPredicted RBP15.77■□□□□ 0.12
UBE3D-207ENST00000509102 MAP6Q96JE9 813 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 WDR76Q9H967 626 aa15.77■□□□□ 0.12
UBE3D-207ENST00000509102 PNRC2Q9NPJ4 139 aaKnown RBP15.77■□□□□ 0.12
UBE3D-207ENST00000509102 DDX28Q9NUL7 540 aaKnown RBP15.77■□□□□ 0.12
UBE3D-207ENST00000509102 LRRC30A6NM36 301 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 PLPP2O43688 288 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 GYPBP06028 91 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 GATA3P23771 443 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 POU1F1P28069 291 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 GRK5P34947 590 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 RPS27P42677 84 aaKnown RBP15.76■□□□□ 0.11
UBE3D-207ENST00000509102 SLC15A1P46059 708 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 RASSF2P50749 326 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 BTG1P62324 171 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 GK2Q14410 553 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-207ENST00000509102 DRAM2Q6UX65 266 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-207ENST00000509102 MUC20Q8N307 709 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-207ENST00000509102 SLC30A2Q9BRI3 323 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 SLC22A4Q9H015 551 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 CENPMQ9NSP4 180 aa15.76■□□□□ 0.11
UBE3D-207ENST00000509102 ZNF878C9JN71 531 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 J3QLI3 93 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 ZNF593O00488 134 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-207ENST00000509102 TCF21O43680 179 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 DEAF1O75398 565 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-207ENST00000509102 FOXH1O75593 365 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 ANXA8P13928 327 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 CBX1P83916 185 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 RSPO1Q2MKA7 263 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-207ENST00000509102 TMEM155Q4W5P6 130 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 TEX30Q5JUR7 227 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 DCAF12L2Q5VW00 463 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 C1orf87Q8N0U7 546 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 SLCO4A1Q96BD0 722 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 SLAMF6Q96DU3 332 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 MEGF10Q96KG7 1140 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 NMNAT2Q9BZQ4 307 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 OPA3Q9H6K4 179 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 METTL17Q9H7H0 456 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-207ENST00000509102 SP140LQ9H930 580 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 GCM1Q9NP62 436 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 DNAJB9Q9UBS3 223 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 POMPQ9Y244 141 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 TANC2Q9HCD6 1990 aa15.75■□□□□ 0.11
UBE3D-207ENST00000509102 FKBP6O75344 327 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 IGHV2-70P01814 119 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 APOC1P02654 83 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 HMGN1P05114 100 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 IRF2P14316 349 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 HSD11B1P28845 292 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 MDH2P40926 338 aaKnown RBP15.74■□□□□ 0.11
UBE3D-207ENST00000509102 GRB2P62993 217 aaKnown RBP15.74■□□□□ 0.11
UBE3D-207ENST00000509102 SPRNQ5BIV9 151 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 ZNF511Q8NB15 262 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 ZNRF4Q8WWF5 429 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 PLEKHA8Q96JA3 519 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 INTS14Q96SY0 518 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 KCNJ15Q99712 375 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 KIF17Q9P2E2 1029 aa15.74■□□□□ 0.11
UBE3D-207ENST00000509102 GGT3PA6NGU5 568 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 PRR23D1E9PI22 279 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-207ENST00000509102 TMEM178BH3BS89 294 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 PRR23D2P0DMB1 279 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-207ENST00000509102 CLUP10909 449 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 OSMP13725 252 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 GSTT1P30711 240 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 MMP16P51512 607 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 EIF2B1Q14232 305 aaKnown RBP15.73■□□□□ 0.11
UBE3D-207ENST00000509102 PCK2Q16822 640 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 LYPD4Q6UWN0 246 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 SHFQ7M4L6 423 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 NAA40Q86UY6 237 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 LRRC28Q86X40 367 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-207ENST00000509102 ERI1Q8IV48 349 aaKnown RBP15.73■□□□□ 0.11
UBE3D-207ENST00000509102 IQCF1Q8N6M8 205 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 OR10S1Q8NGN2 331 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 OR6N2Q8NGY6 317 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 DNAJC9Q8WXX5 260 aa15.73■□□□□ 0.11
UBE3D-207ENST00000509102 SLC7A6OSQ96CW6 309 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms