RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 FBN1P35555 2871 aaKnown RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 IGHV4-30-2A0A087WSY4 118 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 A0A1W2PRQ8 180 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 A6NLC8 198 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 NDUFAB1O14561 156 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ARPC2O15144 300 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 GPRIN2O60269 458 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 PTP4A3O75365 173 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 RAB36O95755 333 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 FAM107AO95990 144 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 IGKV3-15P01624 115 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 IGHG1P01857 330 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 SERPINA5P05154 406 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 IGFBP1P08833 259 aaPredicted RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 ADRA2AP08913 450 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 TSPAN19P0C672 248 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZNF35P13682 527 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 HSD17B1P14061 328 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZNF14P17017 642 aaPredicted RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 NPR2P20594 1047 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ATP6V1B2P21281 511 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 CCNOP22674 350 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 LAP3P28838 519 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ARR3P36575 388 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 CENPAP49450 140 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ERFP50548 548 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 DAP3P51398 398 aaKnown RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZNF84P51523 738 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 NUDT6P53370 316 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 MS4A2Q01362 244 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 SPIBQ01892 262 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 CHRNB3Q05901 458 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 CD47Q08722 323 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 DGCR6Q14129 220 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 MAD2L1BPQ15013 274 aaPredicted RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZBED5Q49AG3 693 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 GKAP1Q5VSY0 366 aaPredicted RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 TMEM53Q6P2H8 277 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 SLC25A47Q6Q0C1 308 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 UGT2A3Q6UWM9 527 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 C16orf89Q6UX73 402 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 TMPRSS11FQ6ZWK6 438 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 SSX8Q7RTT4 187 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 SLC16A14Q7RTX9 510 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 PIWIL3Q7Z3Z3 882 aaKnown RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZER1Q7Z7L7 766 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 BIVMQ86UB2 503 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZNF584Q8IVC4 421 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 RNF113BQ8IZP6 322 aaKnown RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 OFCC1Q8IZS5 231 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 PGAM4Q8N0Y7 254 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZNF525Q8N782 197 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ARIH2OSQ8N7S6 290 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 LRRC75AQ8NAA5 344 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 OR4F15Q8NGB8 312 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 ZNF519Q8TB69 540 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 LIPHQ8WWY8 451 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 RASD2Q96D21 266 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 Q96M85 177 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 NSMCE2Q96MF7 247 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 TSPAN32Q96QS1 320 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 RBP7Q96R05 134 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 DOK1Q99704 481 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 RHNO1Q9BSD3 238 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 FUZQ9BT04 418 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 THTPAQ9BU02 230 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 KATNB1Q9BVA0 655 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 POLR2J2Q9GZM3 115 aaKnown RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 POLR2J3Q9H1A7 115 aaKnown RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 GORASP2Q9H8Y8 452 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 MYEF2Q9P2K5 600 aaKnown RBP3.88□□□□□ -1.79
NUP54-206ENST00000508465 LPAR3Q9UBY5 353 aa3.88□□□□□ -1.79
NUP54-206ENST00000508465 LOC100509620A0A075B734 347 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 TEX13CA0A0J9YWL9 993 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SLC22A23A1A5C7 686 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 PRSS37A4D1T9 235 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 C5orf49A4QMS7 147 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 A6NIZ1 184 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 INAFM1C9JVW0 142 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SLC16A7O60669 478 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 UBL3O95164 117 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 GADD45GO95257 159 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 FARS2O95363 451 aaKnown RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 PPP1R3DO95685 299 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 CLPTM1O96005 669 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SEMG1P04279 462 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 CD14P08571 375 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 MMP7P09237 267 aaPredicted RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 RRM2P31350 389 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 RBMXP38159 391 aaKnown RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 ALDH3B1P43353 468 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 OMPP47874 163 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 MNAT1P51948 309 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 EFNA4P52798 201 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 FXYD6P3P58550 94 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 RAP1BP61224 184 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 ERVS71-1P61550 626 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SNRPD2P62316 118 aaKnown RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 RAP1AP62834 184 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms