RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 OR4K15Q8NH41 348 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 NUBPLQ8TB37 319 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 ZNF524Q96C55 264 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 ZC3H10Q96K80 434 aaKnown RBP15.85■□□□□ 0.13
NUP54-205ENST00000507257 C2orf50Q96LR7 162 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 DHCR7Q9UBM7 475 aaKnown RBP15.85■□□□□ 0.13
NUP54-205ENST00000507257 TINAGQ9UJW2 476 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 CACNA1CQ13936 2221 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 TMEM14DPA8MWL7 114 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 GATCO43716 136 aaKnown RBP15.84■□□□□ 0.13
NUP54-205ENST00000507257 DXOO77932 396 aaKnown RBP15.84■□□□□ 0.13
NUP54-205ENST00000507257 GAPDHP04406 335 aaKnown RBP15.84■□□□□ 0.13
NUP54-205ENST00000507257 CTLA4P16410 223 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 FPR2P25090 351 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 CTNNB1P35222 781 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 LPAR6P43657 344 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 STARD6P59095 220 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 ELAVL1Q15717 326 aaKnown RBP15.84■□□□□ 0.13
NUP54-205ENST00000507257 HYAL4Q2M3T9 481 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 SLC22A6Q4U2R8 563 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 TMPPEQ6ZT21 453 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 TMEM230Q96A57 120 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 KIRREL1Q96J84 757 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 NECAB3Q96P71 396 aaPredicted RBP15.84■□□□□ 0.13
NUP54-205ENST00000507257 SULT4A1Q9BR01 284 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 SLC26A1Q9H2B4 701 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 C5orf66Q9H5L9 145 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 STARD5Q9NSY2 213 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 HRASLS2Q9NWW9 162 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 OR5AC2Q9NZP5 309 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 LHX6Q9UPM6 363 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 SLC5A6Q9Y289 635 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 EMC9Q9Y3B6 208 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 UTS2O95399 124 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 IGHV2-5P01817 119 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 CXCR1P25024 350 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 CD1CP29017 333 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 TMEM268Q5VZI3 342 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 ZNF529Q6P280 563 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 DHRS11Q6UWP2 260 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 SLC16A13Q7RTY0 426 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 POC1AQ8NBT0 407 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 TSACCQ96A04 125 aaPredicted RBP15.84■□□□□ 0.13
NUP54-205ENST00000507257 MALSU1Q96EH3 234 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 C14orf79Q96F83 325 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 TAF9BQ9HBM6 251 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 TMEM131Q92545 1883 aa15.84■□□□□ 0.13
NUP54-205ENST00000507257 MED6O75586 246 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 PLGP00747 810 aaPredicted RBP15.83■□□□□ 0.12
NUP54-205ENST00000507257 CST4P01036 141 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 VSIG8P0DPA2 414 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 FCARP24071 287 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 ADH6P28332 368 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 MMP16P51512 607 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 HSD17B7P56937 341 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 COL13A1Q5TAT6 717 aaPredicted RBP15.83■□□□□ 0.12
NUP54-205ENST00000507257 CLEC18BQ6UXF7 455 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 NKD1Q969G9 470 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 CMBLQ96DG6 245 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 FBRSQ9HAH7 460 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 NIT2Q9NQR4 276 aa15.83■□□□□ 0.12
NUP54-205ENST00000507257 ARHGEF17Q96PE2 2063 aaPredicted RBP15.82■□□□□ 0.12
NUP54-205ENST00000507257 LRP3O75074 770 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 ACRP10323 421 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 RBMS3Q6XE24 437 aaKnown RBP15.82■□□□□ 0.12
NUP54-205ENST00000507257 Q7L0L9 218 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 RD3Q7Z3Z2 195 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 OOSP2Q86WS3 158 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 FAM160A2Q8N612 972 aaPredicted RBP15.82■□□□□ 0.12
NUP54-205ENST00000507257 ST7LQ8TDW4 575 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 RHBDD1Q8TEB9 315 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 CPNE2Q96FN4 548 aaPredicted RBP15.82■□□□□ 0.12
NUP54-205ENST00000507257 CLCC1Q96S66 551 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 MAP3K3Q99759 626 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 MEMO1Q9Y316 297 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 A0A0A6YYC8 382 aaPredicted RBP15.82■□□□□ 0.12
NUP54-205ENST00000507257 C11orf98E9PRG8 122 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 I3L1I5 382 aaPredicted RBP15.82■□□□□ 0.12
NUP54-205ENST00000507257 HCRTR1O43613 425 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 NPIPB7O75200 414 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 ZNF217O75362 1048 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 IGHV2-70P01814 119 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 PMP2P02689 132 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 UCP2P55851 309 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 FAM189A2Q15884 450 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 C5orf46Q6UWT4 87 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 SLC29A4Q7RTT9 530 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 LHFPL1Q86WI0 220 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 SLC26A10Q8NG04 563 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 STARD10Q9Y365 291 aa15.82■□□□□ 0.12
NUP54-205ENST00000507257 LRP4O75096 1905 aa15.81■□□□□ 0.12
NUP54-205ENST00000507257 TRAV20A0A0B4J274 112 aa15.81■□□□□ 0.12
NUP54-205ENST00000507257 FIGNL2A6NMB9 653 aa15.81■□□□□ 0.12
NUP54-205ENST00000507257 NSA2O95478 260 aaKnown RBP15.81■□□□□ 0.12
NUP54-205ENST00000507257 GNB3P16520 340 aa15.81■□□□□ 0.12
NUP54-205ENST00000507257 CPT2P23786 658 aa15.81■□□□□ 0.12
NUP54-205ENST00000507257 CD80P33681 288 aa15.81■□□□□ 0.12
NUP54-205ENST00000507257 SUPT4H1P63272 117 aaKnown RBP15.81■□□□□ 0.12
NUP54-205ENST00000507257 FAM60AQ9NP50 221 aa15.81■□□□□ 0.12
NUP54-205ENST00000507257 TMEM269A0A1B0GVZ9 245 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms