RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PCDHB10Q9UN67 800 aa8.85□□□□□ -0.99
NR1I3-222ENST00000506018 DNHD1Q96M86 4753 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 DOCK11Q5JSL3 2073 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 SVEP1Q4LDE5 3571 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 IFNL4K9M1U5 179 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 WNT9BO14905 357 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 ARPC3O15145 178 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 GASTP01350 101 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 IGHV2-5P01817 119 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 HLA-DQA2P01906 255 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 SCG5P05408 212 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 RAC2P15153 192 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 KITLGP21583 273 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 CDK5R2Q13319 367 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 KCNMB1Q16558 191 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 DCAF12L2Q5VW00 463 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 TTC23Q5W5X9 447 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 ZNF770Q6IQ21 691 aaPredicted RBP8.84□□□□□ -0.99
NR1I3-222ENST00000506018 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.84□□□□□ -0.99
NR1I3-222ENST00000506018 PARP8Q8N3A8 854 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 KLHL36Q8N4N3 616 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 SPICQ8N5J4 248 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 OR2Z1Q8NG97 314 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 OR9Q2Q8NGE9 314 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 ZNF418Q8TF45 676 aaPredicted RBP8.84□□□□□ -0.99
NR1I3-222ENST00000506018 NRG4Q8WWG1 115 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 APOBEC3DQ96AK3 386 aaPredicted RBP8.84□□□□□ -0.99
NR1I3-222ENST00000506018 CMBLQ96DG6 245 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 SAMD8Q96LT4 415 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 ZNF184Q99676 751 aaPredicted RBP8.84□□□□□ -0.99
NR1I3-222ENST00000506018 UBAP1Q9NZ09 502 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 IL19Q9UHD0 177 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 KLHL21Q9UJP4 597 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 NPTNQ9Y639 398 aa8.84□□□□□ -0.99
NR1I3-222ENST00000506018 H3BN98 237 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 RER1O15258 196 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 PLPP2O43688 288 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 FOXH1O75593 365 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 OSMP13725 252 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 SELEP16581 610 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 CDKN2AP42771 156 aaKnown RBP8.83□□□□□ -1
NR1I3-222ENST00000506018 GSSP48637 474 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 DAPP51397 102 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 ECH1Q13011 328 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 CCDC92Q53HC0 331 aaPredicted RBP8.83□□□□□ -1
NR1I3-222ENST00000506018 IZUMO2Q6UXV1 221 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 RASSF6Q6ZTQ3 369 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 PTCHD4Q6ZW05 846 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 HS3ST5Q8IZT8 346 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 DHRSXQ8N5I4 330 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 OR4K13Q8NH42 304 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 TEX47Q8TBZ9 253 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 HAVCR1Q96D42 359 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 ZNF582Q96NG8 517 aaPredicted RBP8.83□□□□□ -1
NR1I3-222ENST00000506018 JMJD8Q96S16 334 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 NMNAT3Q96T66 252 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 SLC29A1Q99808 456 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 HCAR1Q9BXC0 346 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 SRA1Q9HD15 236 aaKnown RBP8.83□□□□□ -1
NR1I3-222ENST00000506018 RPRD1BQ9NQG5 326 aaKnown RBP8.83□□□□□ -1
NR1I3-222ENST00000506018 TMEM106BQ9NUM4 274 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 KCNG2Q9UJ96 466 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 RAB26Q9ULW5 256 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 B9D1Q9UPM9 204 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 PPP1R3CQ9UQK1 317 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 STARD10Q9Y365 291 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 CACNG2Q9Y698 323 aa8.83□□□□□ -1
NR1I3-222ENST00000506018 H0YAE9 185 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 HIST1H1CP16403 213 aaKnown RBP8.82□□□□□ -1
NR1I3-222ENST00000506018 ZNF823P16415 610 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 SRP9P49458 86 aaKnown RBP8.82□□□□□ -1
NR1I3-222ENST00000506018 FXYD6P3P58550 94 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 MALLQ13021 153 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 FBXW12Q6X9E4 464 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 MUC20Q8N307 709 aaPredicted RBP8.82□□□□□ -1
NR1I3-222ENST00000506018 ZNF511Q8NB15 262 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 OR13G1Q8NGZ3 307 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 NANPQ8TBE9 248 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 ZFAND2BQ8WV99 257 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 TSSK2Q96PF2 358 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 PITX2Q99697 317 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 NIPSNAP1Q9BPW8 284 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 G6PC2Q9NQR9 355 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 PTTG3PQ9NZH4 202 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 BAIAP2Q9UQB8 552 aa8.82□□□□□ -1
NR1I3-222ENST00000506018 IGLV1-36A0A0B4J1U3 117 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 LRRC30A6NM36 301 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 SBK2P0C263 348 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 EPHA1P21709 976 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 CPT2P23786 658 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 MDH2P40926 338 aaKnown RBP8.81□□□□□ -1
NR1I3-222ENST00000506018 CRISP1P54107 249 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 AQP4P55087 323 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 BTG1P62324 171 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 HIST1H3AP68431 136 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.81□□□□□ -1
NR1I3-222ENST00000506018 IL18R1Q13478 541 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 MEP1BQ16820 701 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 TMEM155Q4W5P6 130 aa8.81□□□□□ -1
NR1I3-222ENST00000506018 TMEM255AQ5JRV8 349 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms