RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PAICSP22234 425 aaKnown RBP12.06□□□□□ -0.48
HOXC9-202ENST00000504557 GRK5P34947 590 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 MALLQ13021 153 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 EIF2B1Q14232 305 aaKnown RBP12.06□□□□□ -0.48
HOXC9-202ENST00000504557 KLHL12Q53G59 568 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 TMEM236Q5W0B7 351 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 ACSM5Q6NUN0 579 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 SLC27A4Q6P1M0 643 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 FBXW12Q6X9E4 464 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 MRPL21Q7Z2W9 205 aaKnown RBP12.06□□□□□ -0.48
HOXC9-202ENST00000504557 OR8G5Q8NG78 346 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 OR2AE1Q8NHA4 323 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF420Q8TAQ5 688 aaPredicted RBP12.06□□□□□ -0.48
HOXC9-202ENST00000504557 SLAMF6Q96DU3 332 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 PLEKHA8Q96JA3 519 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 C1QTNF5Q9BXJ0 243 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 NMNAT2Q9BZQ4 307 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 TMEM106BQ9NUM4 274 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 KCNG2Q9UJ96 466 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 PPP1R3CQ9UQK1 317 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 C5orf63A6NC05 138 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 ARRDC5A6NEK1 342 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 F5H5P2 479 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 TBX1O43435 398 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF205O95201 554 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 CD55P08174 381 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 ADH4P08319 380 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 SELEP16581 610 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 ANOS1P23352 680 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 SLC25A1P53007 311 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 DVL1P1P54792 670 aaPredicted RBP12.05□□□□□ -0.48
HOXC9-202ENST00000504557 RPS7P62081 194 aaKnown RBP12.05□□□□□ -0.48
HOXC9-202ENST00000504557 SLC3A1Q07837 685 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 GK3PQ14409 553 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 GK2Q14410 553 aaPredicted RBP12.05□□□□□ -0.48
HOXC9-202ENST00000504557 SNAI3Q3KNW1 292 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 C1orf146Q5VVC0 180 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 FAHD2BQ6P2I3 314 aaPredicted RBP12.05□□□□□ -0.48
HOXC9-202ENST00000504557 CD300LDQ6UXZ3 194 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 PGAP1Q75T13 922 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF283Q8N7M2 679 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 OR51F2Q8NH61 342 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 SPRYD4Q8WW59 207 aaPredicted RBP12.05□□□□□ -0.48
HOXC9-202ENST00000504557 TMEM186Q96B77 213 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 RAB39BQ96DA2 213 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 ZMYND19Q96E35 227 aaPredicted RBP12.05□□□□□ -0.48
HOXC9-202ENST00000504557 FAHD2AQ96GK7 314 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 INTS14Q96SY0 518 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 BRD7Q9NPI1 651 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 DNAJC27Q9NZQ0 273 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 PCDHB10Q9UN67 800 aa12.05□□□□□ -0.48
HOXC9-202ENST00000504557 RNF212BA8MTL3 300 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 PRR23D1E9PI22 279 aaPredicted RBP12.04□□□□□ -0.48
HOXC9-202ENST00000504557 J3QW42 95 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 SURF4O15260 269 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 IGHV2-5P01817 119 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 PRR23D2P0DMB1 279 aaPredicted RBP12.04□□□□□ -0.48
HOXC9-202ENST00000504557 OSMP13725 252 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 ANXA8P13928 327 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 HSD11B1P28845 292 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 GSTT1P30711 240 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 RASSF2P50749 326 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 LCN2P80188 198 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 GFOD2Q3B7J2 385 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 KRTAP27-1Q3LI81 207 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 SHQ1Q6PI26 577 aaKnown RBP12.04□□□□□ -0.48
HOXC9-202ENST00000504557 DPY19L4Q7Z388 723 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 OR13G1Q8NGZ3 307 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 DVL3Q92997 716 aaPredicted RBP12.04□□□□□ -0.48
HOXC9-202ENST00000504557 TMEM100Q9NV29 134 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 NPTNQ9Y639 398 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 CUBNO60494 3623 aa12.04□□□□□ -0.48
HOXC9-202ENST00000504557 GGT3PA6NGU5 568 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 IQCF6A8MYZ5 107 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF878C9JN71 531 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 PHF1O43189 567 aaPredicted RBP12.03□□□□□ -0.48
HOXC9-202ENST00000504557 MLNRO43193 412 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 PLPP2O43688 288 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 SELENOFO60613 162 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 DEAF1O75398 565 aaPredicted RBP12.03□□□□□ -0.48
HOXC9-202ENST00000504557 CYB5R3P00387 301 aaPredicted RBP12.03□□□□□ -0.48
HOXC9-202ENST00000504557 ANXA2P07355 339 aaKnown RBP12.03□□□□□ -0.48
HOXC9-202ENST00000504557 HOXB6P17509 224 aaKnown RBP12.03□□□□□ -0.48
HOXC9-202ENST00000504557 NAA10P41227 235 aaPredicted RBP12.03□□□□□ -0.48
HOXC9-202ENST00000504557 CX3CR1P49238 355 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF92Q03936 586 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 GLYATL3Q5SZD4 288 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 LINC01590Q5TEZ4 76 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 COLCA1Q6ZS62 124 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 MOGAT3Q86VF5 341 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 CPOQ8IVL8 374 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 ST7LQ8TDW4 575 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 C1orf159Q96HA4 380 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 MEGF10Q96KG7 1140 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 TVP23BQ9NYZ1 205 aa12.03□□□□□ -0.48
HOXC9-202ENST00000504557 M0R129 80 aa12.02□□□□□ -0.49
HOXC9-202ENST00000504557 CIB2O75838 187 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms