RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PGLYRP3Q96LB9 341 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 HSFY1Q96LI6 401 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 RHNO1Q9BSD3 238 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 C1orf50Q9BV19 199 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 SSBP3Q9BWW4 388 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 ELL3Q9HB65 397 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 VAPAQ9P0L0 249 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-204ENST00000504430 NUBP2Q9Y5Y2 271 aa4.36□□□□□ -1.71
NIPBL-204ENST00000504430 INAFM1C9JVW0 142 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 H7C1H1 209 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 CCL21O00585 134 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 FGF17O60258 216 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 BCAR3O75815 825 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 IGKV5-2P06315 115 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 GP1BBP13224 206 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 RUNX1Q01196 453 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 EIF2B1Q14232 305 aaKnown RBP4.35□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF169Q14929 603 aaPredicted RBP4.35□□□□□ -1.71
NIPBL-204ENST00000504430 SHHQ15465 462 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 HBMQ6B0K9 141 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 BAIAP2L2Q6UXY1 529 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 STAC2Q6ZMT1 411 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 OLIG3Q7RTU3 272 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 HORMAD1Q86X24 394 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 HOGA1Q86XE5 327 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF567Q8N184 647 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 SPPL2BQ8TCT7 592 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 QTRT1Q9BXR0 403 aaKnown RBP4.35□□□□□ -1.71
NIPBL-204ENST00000504430 MIEF1Q9NQG6 463 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 LGALS13Q9UHV8 139 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 HHLA2Q9UM44 414 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 ING4Q9UNL4 249 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 ANKRD65E5RJM6 399 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 PHYHO14832 338 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 CD8AP01732 235 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 CELP19835 753 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 TTPAP49638 278 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 DCDC1P59894 354 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 PRSS8Q16651 343 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 PIANPQ8IYJ0 282 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF676Q8N7Q3 588 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 MAPK15Q8TD08 544 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 RASL11BQ9BPW5 248 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 ARMC1Q9NVT9 282 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 MYH3P11055 1940 aa4.35□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF816-ZNF321PA0A0X1KG74 233 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-204ENST00000504430 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-204ENST00000504430 RFPL4AA6NLU0 287 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 USP27XA6NNY8 438 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 RFPL4AL1F8VTS6 287 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 RP2O75695 350 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 CST2P09228 141 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 CDK9P50750 372 aaKnown RBP4.34□□□□□ -1.71
NIPBL-204ENST00000504430 DEFA1P59665 94 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 GNG3P63215 75 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 CD164Q04900 197 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 CD47Q08722 323 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 RIPPLY1Q0D2K3 151 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 FAM131AQ6UXB0 335 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 C16orf82Q7Z2V1 217 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 SLC26A10Q8NG04 563 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 OR1P1Q8NH06 330 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 ABHD3Q8WU67 409 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 SFRP2Q96HF1 295 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 AGMATQ9BSE5 352 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 DSN1Q9H410 356 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 CKAP5Q14008 2032 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 DOCK3Q8IZD9 2030 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 IGKV1D-8A0A087WSZ0 117 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 C15orf62A8K5M9 175 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF587BE7ETH6 402 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 EIF1BO60739 113 aaKnown RBP4.34□□□□□ -1.71
NIPBL-204ENST00000504430 MT-ND4P03905 459 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 VHLP40337 213 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 EIF1P41567 113 aaKnown RBP4.34□□□□□ -1.71
NIPBL-204ENST00000504430 FBXW4P57775 412 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 AP1S1P61966 158 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 ZBED5Q49AG3 693 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 PVRIGQ6DKI7 326 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 COMMD7Q86VX2 200 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 OR1K1Q8NGR3 316 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 Q8WTZ3 238 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 APOBEC4Q8WW27 367 aaKnown RBP4.34□□□□□ -1.71
NIPBL-204ENST00000504430 MRAP2Q96G30 205 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 RBP7Q96R05 134 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 RAB34Q9BZG1 259 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 PRODH2Q9UF12 536 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
NIPBL-204ENST00000504430 METTL15A6NJ78 407 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 TACSTD2P09758 323 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 CD36P16671 472 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 OMGP23515 440 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 SOX3P41225 446 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 TRIP13Q15645 432 aaPredicted RBP4.34□□□□□ -1.72
NIPBL-204ENST00000504430 AKIRIN2Q53H80 203 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 EIPR1Q53HC9 387 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms