RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TBRG1Q3YBR2 411 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 PABPC1L2AQ5JQF8 200 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 C9orf135Q5VTT2 229 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF774Q6NX45 483 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 VWA1Q6PCB0 445 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 UNQ6126/PRO20091Q6UXV3 157 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 FAM57BQ71RH2 274 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 BTLAQ7Z6A9 289 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 MRGPRGQ86SM5 289 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 COMMD2Q86X83 199 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 SERPINA12Q8IW75 414 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 GABRG1Q8N1C3 465 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 FAM169BQ8N8A8 192 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 OR8B12Q8NGG6 310 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 OR5D14Q8NGL3 314 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 OR13C3Q8NGS6 347 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 TBC1D15Q8TC07 691 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 RGP1Q92546 391 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 AKAP1Q92667 903 aaKnown RBP eCLIP7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 HTRA1Q92743 480 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 KCNS3Q9BQ31 491 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 VKORC1Q9BQB6 163 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 WDR12Q9GZL7 423 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 TPK1Q9H3S4 243 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 CXorf56Q9H5V9 222 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 NEK6Q9HC98 313 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 HMG20AQ9NP66 347 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 AMDHD2Q9Y303 409 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 AKAP13Q12802 2813 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 MED12LQ86YW9 2145 aa7.1□□□□□ -1.27
TOPBP1-202ENST00000503338 NCOR2Q9Y618 2525 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 SVILO95425 2214 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 NCOA6Q14686 2063 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ANXA2P2A6NMY6 339 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 DVL2O14641 736 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 DHRS3O75911 302 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 TOXO94900 526 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 IGLV3-1P01715 115 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 HLA-HP01893 362 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ERCC1P07992 297 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF20P17024 532 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 PSMB1P20618 241 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 TUBG1P23258 451 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 IL32P24001 234 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 STOMP27105 288 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 SOX2P48431 317 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 SCAND1P57086 179 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 MXD1Q05195 221 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 FOXF2Q12947 444 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 INSL4Q14641 139 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 GABRA6Q16445 453 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ODF4Q2M2E3 257 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 C3orf36Q3SXR2 165 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 SFRP5Q5T4F7 317 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 DDI2Q5TDH0 399 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 GLT8D1Q68CQ7 371 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 SFXN4Q6P4A7 337 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 STAC2Q6ZMT1 411 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 Q6ZSR3 168 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 PGAP1Q75T13 922 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 PRSS45Q7RTY3 260 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 C1orf174Q8IYL3 243 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 RDH10Q8IZV5 341 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 PARP16Q8N5Y8 322 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 NKAIN3Q8N8D7 197 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF610Q8N9Z0 462 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 PLPP7Q8NBV4 271 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 OR5L1Q8NGL2 311 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 OR6Q1Q8NGQ2 317 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 OR13C5Q8NGS8 318 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 AKR7LQ8NHP1 331 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ZFAND2BQ8WV99 257 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 PP6455Q8WZ26 134 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 RND1Q92730 232 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 APOBEC3DQ96AK3 386 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 FOXRED1Q96CU9 486 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 CEP19Q96LK0 163 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 C1QTNF5Q9BXJ0 243 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 C6orf62Q9GZU0 229 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 OR10A4Q9H209 315 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ZCCHC4Q9H5U6 513 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 PLEKHA1Q9HB21 404 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 BRD7Q9NPI1 651 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 TUBG2Q9NRH3 451 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF275Q9NSD4 429 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 B3GNT2Q9NY97 397 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ELOVL5Q9NYP7 299 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ZNF224Q9NZL3 707 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 ABRACLQ9P1F3 81 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 V9GY05 133 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 IGF2RP11717 2491 aa7.09□□□□□ -1.27
TOPBP1-202ENST00000503338 DOCK7Q96N67 2140 aa7.09□□□□□ -1.28
TOPBP1-202ENST00000503338 CLDN25C9JDP6 229 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 AIPO00170 330 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 P2RY10O00398 339 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 PIN1P1O15428 100 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 MAGEB3O15480 346 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 ZNHIT1O43257 154 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 TBX1O43435 398 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 RAD51DO75771 328 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms