RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 LNP1A1A4G5 178 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 A8MV72 311 aaPredicted RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 JMJD7P0C870 316 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 FKBP2P26885 142 aaKnown RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 SFTPDP35247 375 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 MFGE8Q08431 387 aaPredicted RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 CCDC157Q569K6 752 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 PDSS1Q5T2R2 415 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 HACD4Q5VWC8 232 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 ASB18Q6ZVZ8 466 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 PPP1R32Q7Z5V6 425 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 CATSPERDQ86XM0 798 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 DND1Q8IYX4 353 aaKnown RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 NTNG2Q96CW9 530 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 MRI1Q9BV20 369 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 STRADBQ9C0K7 418 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 SLC5A7Q9GZV3 580 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 PROK2Q9HC23 129 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 SH2D2AQ9NP31 389 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 HDGFL3Q9Y3E1 203 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 COL6A3P12111 3177 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 A0A0B4J293 547 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 H3BSH0 61 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 TRAPPC2P0DI81 140 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 TRAPPC2BP0DI82 140 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 CALCBP10092 127 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 MMP15P51511 669 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 CAPZA1P52907 286 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 CLDN12P56749 244 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 CLDN20P56880 219 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 RPS18P62269 152 aaKnown RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 ZNF239Q16600 458 aaKnown RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 PNLIPRP3Q17RR3 467 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 TMEM176BQ3YBM2 270 aaPredicted RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 FCRLAQ7L513 359 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 GTPBP8Q8N3Z3 284 aaPredicted RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 TMEM156Q8N614 296 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 ZNF596Q8TC21 504 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 TSEN15Q8WW01 171 aaKnown RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 NKD1Q969G9 470 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 YIPF5Q969M3 257 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 MCHR2Q969V1 340 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 PPP1R14AQ96A00 147 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 SLC25A38Q96DW6 304 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 ZFP3Q96NJ6 502 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 RBP7Q96R05 134 aa10.29□□□□□ -0.76
USP46-204ENST00000503060 MRPL13Q9BYD1 178 aaKnown RBP10.29□□□□□ -0.76
USP46-204ENST00000503060 ZNF814B7Z6K7 855 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 TRAF3IP2O43734 574 aaPredicted RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 AQP8O94778 261 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 ADRB1P08588 477 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 CSF1P09603 554 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 CBR1P16152 277 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 OTX2P32243 289 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 DGCR2P98153 550 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 CNN3Q15417 329 aaKnown RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 SLC22A10Q63ZE4 541 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 BHLHA15Q7RTS1 189 aaPredicted RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 TIPARPQ7Z3E1 657 aaKnown RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 LINC00346Q8IVM7 164 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 GLB1L2Q8IW92 636 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 ARMC10Q8N2F6 343 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 DNAAF1Q8NEP3 725 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 OR6F1Q8NGZ6 308 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 ST7LQ8TDW4 575 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 CT55Q8WUE5 264 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 VRK1Q99986 396 aaPredicted RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 POFUT1Q9H488 388 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 ASCL3Q9NQ33 180 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 OR5V1Q9UGF6 321 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 TCFL5Q9UL49 500 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 FREM3P0C091 2139 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 ANXA2P2A6NMY6 339 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 CTDSPLO15194 276 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 SRSF10O75494 262 aaKnown RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 SCGB1D1O95968 90 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 MAS1P04201 325 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 ANXA2P07355 339 aaKnown RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 LIFP15018 202 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 TCN2P20062 427 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 SLC36A2Q495M3 483 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 HIKESHIQ53FT3 197 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 RNASE12Q5GAN4 147 aaKnown RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 PLA2G2CQ5R387 149 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 IZUMO1Q8IYV9 350 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 CPEB3Q8NE35 698 aaKnown RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 CPT1CQ8TCG5 803 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 C11orf40Q8WZ69 217 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 MIB2Q96AX9 1013 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 OXGR1Q96P68 337 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 MARVELD1Q9BSK0 173 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 ABCG5Q9H222 651 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 METTL8Q9H825 291 aaKnown RBP10.28□□□□□ -0.76
USP46-204ENST00000503060 PISDQ9UG56 409 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 R4GMQ9 66 aa10.28□□□□□ -0.76
USP46-204ENST00000503060 MARCH11A6NNE9 402 aa10.27□□□□□ -0.76
USP46-204ENST00000503060 G3V3Y1 287 aa10.27□□□□□ -0.76
USP46-204ENST00000503060 GSTZ1O43708 216 aaPredicted RBP10.27□□□□□ -0.76
USP46-204ENST00000503060 RAD1O60671 282 aa10.27□□□□□ -0.76
USP46-204ENST00000503060 IGHG1P01857 330 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms