RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TRIP10Q15642 601 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 PGAP1Q75T13 922 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 TIGD4Q8IY51 512 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 ZNF283Q8N7M2 679 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 OR8G5Q8NG78 346 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 OR13G1Q8NGZ3 307 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 ST7LQ8TDW4 575 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 THEM6Q8WUY1 208 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 CCL17Q92583 94 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 PKP2Q99959 881 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 ABHD6Q9BV23 337 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 OSBPL10Q9BXB5 764 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 TOR3AQ9H497 397 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 TREM2Q9NZC2 230 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-213ENST00000498495 OAZ3Q9UMX2 235 aa10.88□□□□□ -0.67
HSPG2-213ENST00000498495 CHD3Q12873 2000 aaKnown RBP10.87□□□□□ -0.67
HSPG2-213ENST00000498495 A8MV72 311 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-213ENST00000498495 SELENOFO60613 162 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 RP2O75695 350 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 APOC1P02654 83 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 CD55P08174 381 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-213ENST00000498495 TNFRSF1AP19438 455 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 IGFBP5P24593 272 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 OTX1P32242 354 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-213ENST00000498495 SLC3A1Q07837 685 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 GK2Q14410 553 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-213ENST00000498495 SLX4IPQ5VYV7 408 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 Q6ZR03 302 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 RHOUQ7L0Q8 258 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 MRPL21Q7Z2W9 205 aaKnown RBP10.87□□□□□ -0.67
HSPG2-213ENST00000498495 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-213ENST00000498495 TCEANCQ8N8B7 351 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 BBS1Q8NFJ9 593 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 HPS1Q92902 700 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 TEAD3Q99594 435 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 CIB1Q99828 191 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 RBM4BQ9BQ04 359 aaKnown RBP10.87□□□□□ -0.67
HSPG2-213ENST00000498495 SP140LQ9H930 580 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 TMEM100Q9NV29 134 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 IL19Q9UHD0 177 aa10.87□□□□□ -0.67
HSPG2-213ENST00000498495 LOC100289279A0A1B0GTE1 492 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 ZAR1LA6NP61 321 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 IQCF6A8MYZ5 107 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 CLDN25C9JDP6 229 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 H3BNX3 289 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 PRKYO43930 277 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 TGFAP01135 160 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 LYNP07948 512 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 H2BFMP0C1H6 154 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 SLC2A1P11166 492 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 SLC2A5P22732 501 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 EPHA2P29317 976 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 NAA10P41227 235 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-213ENST00000498495 CX3CR1P49238 355 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 MVKQ03426 396 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 SNAI3Q3KNW1 292 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 C6orf52Q5T4I8 152 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 LCN1P1Q5VSP4 162 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 PEG10Q86TG7 708 aaKnown RBP10.86□□□□□ -0.67
HSPG2-213ENST00000498495 BHLHE23Q8NDY6 225 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 OTOSQ8NHW6 89 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 RNF133Q8WVZ7 376 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 SPRYD4Q8WW59 207 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-213ENST00000498495 RAB1CQ92928 201 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 MSI2Q96DH6 328 aaKnown RBP10.86□□□□□ -0.67
HSPG2-213ENST00000498495 TIMD4Q96H15 378 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 NARFLQ9H6Q4 476 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 TMEFF2Q9UIK5 374 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-213ENST00000498495 LAMP5Q9UJQ1 280 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 CACNG2Q9Y698 323 aa10.86□□□□□ -0.67
HSPG2-213ENST00000498495 GGT3PA6NGU5 568 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 TBX1O43435 398 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 LMX1BO60663 402 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 ANXA2P07355 339 aaKnown RBP10.85□□□□□ -0.67
HSPG2-213ENST00000498495 POLR2IP36954 125 aaKnown RBP10.85□□□□□ -0.67
HSPG2-213ENST00000498495 HCCSP53701 268 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 PRSS12P56730 875 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 EFNB1P98172 346 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 ZNF92Q03936 586 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 SPRNQ5BIV9 151 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 AVPI1Q5T686 147 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 C12orf73Q69YU5 71 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 MEPCEQ7L2J0 689 aaKnown RBP10.85□□□□□ -0.67
HSPG2-213ENST00000498495 SLC16A9Q7RTY1 509 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 CLDND2Q8NHS1 167 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 TMEM163Q8TC26 289 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 ITLN1Q8WWA0 313 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 OR2V2Q96R30 315 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 IL4I1Q96RQ9 567 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 AMELYQ99218 206 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 SLC30A2Q9BRI3 323 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 REPIN1Q9BWE0 567 aaKnown RBP10.85□□□□□ -0.67
HSPG2-213ENST00000498495 RIBC2Q9H4K1 309 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 S100A14Q9HCY8 104 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 ORC6Q9Y5N6 252 aa10.85□□□□□ -0.67
HSPG2-213ENST00000498495 CD300LBA8K4G0 201 aa10.84□□□□□ -0.67
HSPG2-213ENST00000498495 H0YL77 283 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms